Protein

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Genbank accession
WXB48312.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MANILFKNADKTVNTIAERNAISPKLDDMEVVVLDAIADIEAGPGAAVYKWSESLNVWIMLANSKDEPLTSLSFSNDTLTYVDENGSSTNIDLSIYANLDGDTFTGDVSISKAAGRFIFDELDYANGNSGIEWTTPVGQDIELIHEIIDSNIQTAGGNGQALKVRQSGSSAAVAGLEVEGEIFADTNKRVFHDGYHPNADKLTSSRNISLTGDVTGSASFDGSSNISIDAVVQDDSHNHESLKNLFTTRTSSQSNHYGASVVLLAPAYDGVEKASDKLDGNITLYRGNSTALNTCVSIDISYHSAYIDDILTYHYNVSEGRNTEFVYCTYNGVKYLALNIKANSQNNIIYWNGIRSGDLSEFFTVVDYIGDGTQGGALTIVNQEVHDSIEVALPTSSIFGSGDGTWSIDYDGYKGHLSDIDISGTVLLGDKRKINQSVELLENQSTQYIILCKNEANNDVNGHLAWQRTSGNFQGQQIDVIVSSRSSGIVGGSLKSFSFEQQSEEFKLVTFTSVSDSESYVAIKYYGNDYPANLFSYFDGYINTTAGSRELTVVDATDISNEADLNTRTKFEINGNSVFHEGNQPDYTQVTGLVSELDNRIEKTVEDLTEAQVEALFSEQKIAIKRTVSTIPGIPGTRSLIHLPNGLGGWQLAARSIGSEIHVRAANADGSEIGPWERIFTTGYTPSISQISGLQSELDDKLDSLSGTKGDIYVHNGTNFVKLSAGVDGQILVSDSSTATGLKWDYPTIG
Physico‐chemical
properties
protein length:750 AA
molecular weight: 81149,06960 Da
isoelectric point:4,46876
aromaticity:0,08533
hydropathy:-0,27987

Domains

Domains [InterPro]
DC_1903
ATT
8–629
DC_1903 DC_0393
Coil
Unmapped
594–614
Coil
WXB48312.1
1 750
Architecture
ATT
STR
ATT 8-629 | STR 660-749 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXB48312.1
1 750
Domain Start End Length (AA) Confidence
N-terminal 1 407 407 0,3882
Central domain 408 609 203 0,2027
C-terminal 610 750 140 0,4542
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-407
Central
408-609
C-terminal
610-750

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VB_VaC_SRILMA
[NCBI] 		3133107 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXB48312.1 [NCBI]
Genbank nucleotide accession
PP083314 [NCBI]
CDS location
range 174952 -> 177204
strand +
CDS
ATGGCTAATATTTTATTTAAGAATGCCGATAAAACAGTTAATACAATCGCAGAGAGGAATGCCATATCTCCTAAACTGGATGATATGGAAGTTGTGGTTCTGGATGCTATTGCTGACATTGAGGCTGGTCCGGGTGCTGCTGTATATAAATGGAGTGAATCGCTTAACGTTTGGATAATGTTAGCGAATTCTAAGGATGAGCCATTAACGTCACTTTCATTTTCGAATGATACATTGACTTATGTTGATGAAAATGGTTCATCTACTAATATCGATCTATCTATATATGCAAACCTAGATGGTGATACGTTTACTGGTGATGTTTCAATTAGTAAGGCAGCTGGTCGTTTTATATTTGATGAATTAGATTATGCCAATGGAAATTCTGGAATTGAATGGACTACACCGGTTGGTCAAGATATTGAATTAATCCACGAAATAATTGATAGTAATATACAAACCGCTGGTGGTAATGGTCAAGCTCTAAAGGTTCGTCAAAGCGGTTCGTCTGCAGCGGTAGCTGGTTTGGAAGTTGAGGGTGAAATTTTTGCAGATACTAATAAACGAGTTTTCCACGACGGCTATCATCCAAATGCTGACAAGTTGACATCATCTCGAAATATTTCACTAACTGGTGATGTAACTGGTAGTGCATCGTTTGATGGTTCTTCGAATATTTCAATAGATGCCGTTGTTCAAGATGATTCGCATAATCATGAGAGTTTAAAGAATTTATTTACTACAAGAACTTCATCACAATCGAATCACTACGGTGCGAGTGTGGTACTTTTAGCTCCAGCATATGACGGTGTAGAAAAAGCATCGGATAAATTAGATGGTAATATCACATTATATAGAGGTAATTCAACTGCTCTGAATACATGTGTTAGTATTGATATAAGTTATCATTCTGCTTATATTGACGACATATTGACATATCACTATAATGTCTCCGAAGGAAGAAACACTGAATTTGTATATTGTACATATAATGGAGTAAAATATCTCGCTTTAAATATAAAAGCGAACTCTCAGAATAATATCATTTATTGGAATGGTATTCGTTCTGGGGATCTTTCTGAATTCTTCACAGTAGTTGATTATATCGGTGATGGTACACAAGGTGGTGCTTTGACCATCGTCAATCAAGAGGTTCATGATAGTATTGAAGTTGCTTTGCCAACTAGTTCAATATTTGGAAGTGGTGATGGTACTTGGTCTATCGACTATGATGGTTATAAGGGTCACCTTTCTGACATTGATATATCTGGTACTGTACTGCTTGGTGATAAAAGAAAAATCAATCAATCGGTCGAACTATTAGAAAACCAATCAACTCAATATATCATACTTTGTAAAAATGAAGCGAATAATGATGTTAATGGTCATCTTGCTTGGCAGAGGACATCCGGAAATTTCCAGGGTCAACAAATAGATGTCATTGTTTCATCTAGATCTAGTGGAATAGTTGGTGGTTCACTAAAGTCATTCTCTTTTGAACAGCAGAGTGAAGAGTTTAAGTTAGTAACATTTACATCGGTTAGCGACAGTGAAAGCTATGTTGCGATCAAATACTACGGTAATGATTATCCAGCGAATCTTTTTTCATATTTCGACGGATATATTAATACGACGGCAGGTTCACGTGAGTTAACGGTTGTTGATGCAACAGATATTTCTAATGAGGCTGATTTAAACACACGTACTAAATTTGAAATCAACGGTAATTCAGTCTTTCACGAGGGTAATCAACCTGATTATACTCAAGTAACTGGATTAGTAAGTGAACTAGACAACCGGATCGAAAAAACTGTGGAAGATTTGACTGAGGCTCAAGTCGAAGCTTTGTTTAGTGAGCAGAAGATAGCTATAAAAAGAACTGTTTCAACTATACCTGGCATCCCTGGAACACGCTCACTTATTCACCTCCCTAATGGGCTAGGAGGTTGGCAATTAGCAGCCCGAAGCATTGGTTCAGAAATACATGTAAGAGCGGCCAATGCGGACGGAAGTGAAATTGGTCCATGGGAAAGAATATTCACGACCGGATACACACCAAGTATATCCCAAATTAGTGGTTTACAGTCGGAATTGGATGATAAGTTAGATTCATTATCTGGAACGAAAGGTGACATATACGTTCACAACGGAACGAATTTTGTCAAGTTGAGCGCTGGTGTTGATGGACAGATACTTGTATCTGACAGCTCTACAGCTACTGGTTTAAAATGGGATTATCCAACAATCGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b77386fd914137dd7fbea353094f9ef966cc67d83909c3b68dc5c6f87561a66f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50