Protein

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Genbank accession
AUR97023.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSCEDYPTAQTAKTFKLDAETVNEVVTLEQDRTSEASDGKTKKTLWGIETDATNQRNEFEQLASDQRDNFEVSFSSQFNFKRIGNISDYAGQSLPEADKLNSYQYPDDSGDWYVPEQGQSFPITIPEDPTVAGSNWLLQSPSGVYRGLWPDTGGSANKGDTYQTQTGGTPTGQYFTALKNTTAAPVGDDVNWREVVSVNVLSATIEEKILIYTDIVHKASGGNSAVDNMIANATMGEHCKCENGTNFKRISTSNSDITDFKYLSGGNLLDFSGSDAVGFDSTQACQLMADTCGIVDSKNYTNPVEIGVVTTTRKTKFNMPEVLMLDTSSVEVAFNLNHADSEFKGNINGGGGYRSAVNLNADRCKFDGYVHNLESTADSTNWMSGVEINSGEGCRVKARMKNLVRSGNNDSVPRSVTAQGTSKDWHIELLDCEDVNGGLSQTTNGTFDFIKIINATDNGLYNLGGEVKGSYLMYKGSEEAIVHKGICNITDVDYEGDGLPIGYEDGDALWIGNLHLKGQATQVVRSRPGNSITNKIEIDSITGDASTKQLFGTSVGQLKKFIVKDIDLICPYNRSEAFLPFVSLSGVLEYHIKNWKVRVIDLEDAISGSTRLQMSMPGSLDSDPDAPFSTVENIDFFLYASDGVTKSPGEFRITGLAQDKVFAKGIYWQTNIGPYGREATWSNGVRDSTTSGVVAGKWKAGTDLINSTATSAPFRRRCTVSGEPGTWVAY
Physico‐chemical
properties
protein length:730 AA
molecular weight: 79395,85200 Da
isoelectric point:4,72323
aromaticity:0,08904
hydropathy:-0,44301

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR97023.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,9883
Central domain 281 670 391 0,9840
C-terminal 671 730 59 0,9576
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-670
C-terminal
671-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.236.O._10N.261.52.C4
[NCBI] 		1881265 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR97023.1 [NCBI]
Genbank nucleotide accession
MG592600.1 [NCBI]
CDS location
range 23816 -> 26008
strand +
CDS
ATGAGCTGTGAAGATTACCCAACCGCACAGACAGCAAAGACGTTTAAGCTTGATGCTGAGACTGTAAATGAAGTTGTCACGCTAGAGCAAGATAGAACAAGCGAGGCTAGTGACGGAAAGACAAAGAAAACCCTATGGGGAATTGAGACTGATGCGACAAATCAGCGTAATGAGTTTGAGCAGCTAGCATCTGACCAGCGTGATAATTTTGAGGTTAGCTTTAGCTCTCAATTCAATTTCAAGCGAATTGGTAATATTTCAGATTACGCAGGGCAATCATTACCAGAGGCTGATAAACTTAACTCATACCAATATCCTGATGATTCTGGCGACTGGTACGTGCCAGAGCAAGGTCAATCGTTCCCAATCACAATCCCTGAAGACCCTACAGTAGCCGGTAGTAATTGGCTTCTTCAGTCGCCTTCTGGGGTTTATCGCGGATTATGGCCCGACACCGGCGGCAGTGCCAACAAGGGCGACACATACCAAACACAAACAGGCGGCACACCTACAGGTCAATACTTCACGGCACTAAAAAACACAACCGCCGCCCCTGTTGGTGATGATGTTAACTGGCGTGAGGTTGTTAGTGTTAATGTTTTAAGCGCCACTATTGAAGAGAAAATACTAATCTACACCGACATAGTTCACAAAGCTTCAGGTGGTAATTCTGCTGTTGATAATATGATCGCAAATGCCACTATGGGCGAGCATTGCAAGTGCGAGAACGGAACTAACTTTAAAAGAATTTCAACCTCCAACTCTGACATTACGGATTTTAAATATTTATCTGGCGGTAATCTGCTCGACTTTAGCGGATCTGACGCTGTTGGGTTTGACTCAACTCAAGCTTGTCAACTAATGGCTGATACTTGCGGGATTGTAGATTCAAAAAATTACACCAACCCCGTTGAAATTGGCGTAGTTACAACTACAAGAAAAACAAAGTTCAACATGCCTGAAGTTTTAATGCTGGACACTTCTTCAGTCGAGGTAGCTTTTAATCTAAACCATGCTGATTCTGAATTTAAAGGAAACATAAATGGTGGTGGTGGCTATCGAAGCGCCGTGAACCTTAACGCCGATAGATGTAAATTCGATGGTTATGTACACAACCTAGAGTCTACAGCAGACTCCACCAACTGGATGAGTGGCGTAGAAATAAACTCAGGCGAGGGTTGCAGAGTAAAGGCTAGAATGAAAAACCTAGTGAGATCTGGTAACAATGACTCTGTACCGCGAAGCGTTACCGCGCAAGGCACATCTAAAGATTGGCACATTGAGTTACTTGATTGCGAGGATGTGAATGGCGGATTGTCTCAAACAACAAACGGAACGTTTGACTTCATCAAGATAATCAACGCAACGGATAATGGATTATACAACCTTGGCGGGGAGGTTAAAGGTTCATATCTAATGTACAAAGGCTCTGAAGAAGCGATCGTACATAAAGGCATCTGTAATATAACCGATGTTGACTATGAGGGTGATGGTCTTCCAATAGGATATGAAGACGGTGACGCGCTATGGATTGGCAACTTACACCTAAAGGGACAAGCAACACAGGTCGTGAGATCTAGGCCTGGAAATTCCATAACTAACAAGATTGAAATAGACTCAATTACTGGTGACGCATCGACAAAACAGTTATTCGGCACTTCAGTGGGGCAGCTCAAGAAATTTATCGTTAAAGATATTGATTTGATTTGTCCATACAATAGATCAGAGGCTTTCCTTCCGTTTGTTAGTTTATCTGGAGTTCTTGAATACCACATCAAGAATTGGAAGGTAAGGGTTATAGATTTGGAGGATGCAATTTCTGGATCGACTAGACTTCAAATGTCTATGCCTGGAAGTTTAGACTCAGACCCTGACGCGCCTTTCTCAACTGTGGAAAATATCGATTTCTTTTTGTATGCGTCTGATGGTGTGACAAAATCACCGGGTGAGTTCAGAATCACAGGGCTTGCTCAGGATAAGGTATTCGCCAAGGGTATTTATTGGCAAACAAACATAGGCCCATACGGAAGAGAAGCAACATGGAGCAACGGGGTTAGAGACTCAACCACTAGCGGCGTGGTTGCCGGAAAGTGGAAGGCAGGGACAGACTTAATAAACTCAACAGCAACATCAGCACCATTTAGAAGGCGCTGTACAGTTTCTGGCGAGCCGGGGACTTGGGTTGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7133526cbe3cd678982c47991116d982f86ea3fa31f450c33be0dc4ddd1c1ae0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7781
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank