Protein

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Genbank accession
XII34079.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPLYSQSIKNLKSGISQQPEILKYPEQGNQQINGWSSEIAGLQKRPPIIFNRMLGRKGLYGDAPFIHLINRDEHERYYAIFTGSEIKVIGLDGTPYVVKGNFSYVQTNNPRKDLRMITVADYTFVVNTSKVIKEDTSKNLPDFNEKQDALINVRGGQYGRTLIVGFNGAVQAKYLIPNGDKPEHVKNTDSQFIAEELAKQMRKKLPTWTFTVGQGYIHIQAPQGTSIDNLYTKDGYADQLLNPVTHYVQTFNKLPLVAPDGYMVKIVGDTSKTADSYYVKYSAAKKVWAETLGWNTPKGFLDNTMPHTLVRESDGTFSFKVHEWKQRRCGDEDTNPLPSFVDSSITDIFFYRNRLGFLSGENVILSRTSRYFDFFPASVANNSDDDPIDVAISHNRISNLKFAVPFSEELLLWSDEAQFTLRSSSILSARTIELNLVTEFDVSDQARPFGIGRGIYFANPRSTFTSISRYYAVQDVSSVRNAEDMTAHVPNYIPNGVFSIHGSNTENFCTVLTEGAPSKIFIYKYLYIDEQLLQQSWSHWDLGEECTILACTTIGSKMTILFENQHNVFIGTVRFTRDIKDFPQEPYRSHLDLKTLYTIPTGKYNITTNITRIRLADIYNGARFTRGKVTLMGVDGRNFEFEPKEDSWTSDDTMDLQGDYSGQQFVVGFNIQFTYEFAKFLIKKADKDGSMTTEDIGRLQLRRAWVNYEESGAFSVKVVHGSTSFNYEMAGSRLGSRKLRIGELNISTDQFRFPVTGNALHTQVFLLSDSPTPLNIIGCGWEGSYIRRSRTI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89843,18770 Da
isoelectric point:6,75670
aromaticity:0,11869
hydropathy:-0,39861

Domains

Domains [InterPro]
IPR058003
TTP
1–792
IPR058003
XII34079.1
1 792
Architecture
TTP
TTP 1-792
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XII34079.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9927
Central domain 145 343 200 0,0805
C-terminal 344 792 448 0,2402
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp1
[NCBI] 		3127672 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XII34079.1 [NCBI]
Genbank nucleotide accession
PP978974 [NCBI]
CDS location
range 13961 -> 16339
strand -
CDS
ATGCCACTATATAGCCAAAGTATTAAGAATTTAAAAAGTGGTATCAGCCAACAGCCAGAGATTTTAAAATACCCAGAACAAGGTAACCAACAAATTAATGGGTGGTCTAGTGAAATCGCAGGGTTACAAAAGAGACCTCCTATTATCTTCAATCGTATGCTTGGCCGTAAAGGTCTCTATGGGGACGCTCCGTTCATTCATTTAATTAATCGTGATGAACATGAGAGATACTATGCTATCTTCACTGGGTCTGAAATCAAGGTGATTGGTCTTGATGGCACACCTTATGTAGTCAAAGGGAATTTCTCTTATGTGCAAACAAATAACCCACGCAAAGACCTCCGAATGATTACAGTCGCTGATTATACTTTCGTAGTTAATACTTCAAAGGTAATCAAAGAGGACACCTCAAAGAATCTACCAGACTTCAATGAGAAGCAAGATGCTTTGATAAATGTTCGAGGTGGACAATATGGGAGAACTCTCATTGTAGGTTTTAACGGTGCAGTACAAGCAAAATATTTGATTCCAAACGGGGATAAACCAGAACACGTTAAGAACACTGACTCTCAATTTATTGCTGAGGAATTAGCCAAACAAATGAGAAAAAAGTTACCAACATGGACGTTTACTGTTGGTCAAGGCTACATTCACATTCAAGCACCACAAGGCACATCCATTGATAATCTTTATACGAAAGACGGGTATGCAGACCAATTGTTAAACCCTGTGACACACTATGTCCAGACGTTTAATAAGCTACCTTTAGTGGCACCAGATGGCTACATGGTGAAGATTGTTGGTGATACCTCGAAGACAGCTGATAGTTATTACGTTAAGTATAGTGCAGCCAAGAAGGTGTGGGCAGAGACATTAGGTTGGAATACACCAAAAGGTTTCCTTGATAATACAATGCCTCATACTTTAGTTCGTGAATCAGACGGTACATTCTCATTTAAGGTTCATGAGTGGAAGCAGAGACGGTGTGGTGATGAAGACACAAACCCACTACCGTCTTTCGTAGATAGTTCTATTACAGATATTTTCTTCTACCGTAACCGATTGGGGTTCCTTAGTGGTGAGAACGTAATCCTGAGTAGGACATCACGTTACTTCGACTTCTTCCCAGCTAGTGTAGCAAATAATTCCGATGATGACCCTATTGATGTAGCAATTAGTCATAATAGGATTAGTAATCTTAAATTTGCGGTACCATTTAGCGAGGAGCTATTATTGTGGTCTGATGAAGCTCAGTTCACATTGAGGTCTTCAAGTATACTCTCAGCTCGAACCATTGAGTTAAACTTAGTGACCGAGTTTGATGTGAGCGACCAAGCAAGACCGTTTGGTATTGGTCGTGGCATTTACTTTGCGAACCCACGAAGCACCTTTACGTCTATCAGTCGGTATTATGCGGTACAAGACGTATCAAGTGTGCGTAATGCTGAGGATATGACAGCCCATGTCCCTAACTATATCCCAAATGGGGTCTTTAGTATTCATGGGTCTAACACAGAGAATTTCTGTACGGTACTCACTGAGGGCGCACCAAGTAAGATTTTCATCTACAAATACTTGTACATAGACGAACAGTTACTCCAGCAGTCTTGGTCGCATTGGGATTTAGGTGAGGAGTGTACTATCTTGGCTTGTACAACTATTGGTAGTAAGATGACGATTCTATTTGAGAATCAACATAATGTGTTCATAGGGACAGTAAGATTCACAAGAGACATCAAGGACTTCCCACAGGAGCCTTATAGGTCTCATTTAGACTTAAAGACCCTTTACACAATTCCAACCGGTAAATACAATATCACGACGAACATCACACGGATTCGTCTAGCTGATATTTATAACGGTGCAAGATTCACAAGAGGTAAAGTCACCTTAATGGGTGTTGATGGTCGAAACTTTGAGTTCGAACCGAAAGAGGACTCCTGGACATCTGACGACACTATGGACTTACAAGGGGATTACTCTGGGCAACAATTCGTAGTTGGTTTCAACATTCAGTTTACTTATGAGTTCGCTAAGTTCTTAATTAAGAAAGCGGATAAAGATGGGTCGATGACCACCGAAGATATTGGTAGGTTACAACTACGGAGAGCATGGGTTAACTATGAGGAGTCTGGGGCATTTAGTGTGAAAGTCGTTCATGGTTCAACAAGTTTTAACTATGAAATGGCAGGGTCTAGATTAGGGTCTAGGAAGCTTCGTATAGGTGAATTAAATATTAGCACAGACCAGTTCAGGTTCCCTGTTACAGGTAATGCTTTACACACACAAGTCTTCTTACTTAGTGACTCACCAACACCACTAAACATTATCGGTTGTGGTTGGGAAGGTAGCTATATCCGAAGAAGTAGAACAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
afd8cb53a7d014d0a9df946ee3e72cafc9372e264f6d433f166f3e4db240ee17
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50