Protein

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Genbank accession
QDB70330.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSNNPLGSTSVSDMFLNAGNLDKALNGNQDSWIDRFGVERVSWSYIEKVTKTGELSKQAREALRRSYAEAGLNMVDGSFEKGGILVNANDVLLHEATGKCYSGNAGTVAPGTLPTAGGFQSRDEYISFYITPEMYGARGLPYDDTTALRDAMQAAVDINKPLLLLKSYGHKGQVTAMPKKHGDRLVIYGNGNTLQRLEWSNTDWWGICFYRNWHDTTPLYKNTSFIVRDLNVDCGFNESNFNWDAPTSAKPGVSTASMATAAENVVMHNVQISNSQRYGLACIWPKFVEIKNFRTVNLGGKAYESGDHDSYSDPLLLRMIQGGGKIDIDGFNAVGIGYPTSPMSRIGISAQDCTGTFTFSLRDAEIFGFERTLHFEHMDYYYTVNIDALDSKGTFCGVHVTRGAGTINVQPSINIENSQITVCKNTFYKPGMFEFSEAIAGWVRDARRSDEDASLGAVFNISNTKLNIGAGLDGIVYPVPWGGNVNLSNCKINYNNTNSVKQSGYTRIENSVITGLGTSGEYFFPWNPTTHQVTIELDNCWLELSPLADKTKSAKFHHSFGLVKGPYDNVKNCKIRGHIKLPINESVDSGNHFLFLANNDLDAASQVGSLSLTTENTGEFPPRGCVAQVGSEVIPASKTANNFVKGGYVVASAGLKLRDIMTGLRTGIYTLVVRPTTGSSSIAMAVVSPMDPGYGKCLQVIKVLSPTVFSSLTPERFGRDQTLDGLKIEFDTTNILWYKNPTDGTNVVNIAWGLYAGNISADIYKG
Physico‐chemical
properties
protein length:767 AA
molecular weight: 83788,24370 Da
isoelectric point:6,09754
aromaticity:0,10039
hydropathy:-0,25750

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB70330.1
1 767
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9865
Central domain 145 592 449 0,9825
C-terminal 593 767 174 0,9577
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-592
C-terminal
593-767

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage CF8
[NCBI] 		2575324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB70330.1 [NCBI]
Genbank nucleotide accession
MK774614.2 [NCBI]
CDS location
range 163685 -> 165988
strand +
CDS
ATGAGTAGTAATAATCCCTTAGGGAGTACGAGTGTTTCTGATATGTTCTTAAACGCTGGTAACTTAGATAAAGCACTTAATGGAAATCAAGATAGTTGGATTGATCGATTTGGTGTAGAACGTGTAAGTTGGAGCTACATTGAGAAAGTAACGAAGACAGGGGAATTGTCAAAACAAGCTCGTGAAGCGCTGCGGAGAAGTTACGCAGAAGCTGGGTTGAATATGGTTGACGGGAGCTTTGAGAAAGGCGGGATTCTCGTTAATGCGAATGATGTGTTGCTACATGAAGCTACCGGGAAATGTTATTCTGGGAATGCTGGAACAGTGGCTCCTGGAACGTTACCCACTGCAGGTGGGTTTCAATCCAGGGACGAATACATTAGTTTTTACATCACACCTGAAATGTATGGCGCAAGGGGACTTCCGTATGACGACACAACTGCGTTAAGGGACGCAATGCAAGCTGCCGTCGATATAAATAAACCGCTCTTGTTATTAAAAAGTTATGGACACAAGGGCCAAGTAACAGCTATGCCCAAAAAACATGGTGACCGTTTGGTCATTTATGGAAACGGAAACACATTACAAAGGCTGGAGTGGTCAAATACAGATTGGTGGGGCATCTGTTTTTACCGCAATTGGCATGACACAACGCCTTTGTACAAAAATACAAGTTTCATAGTTAGAGATTTGAACGTAGATTGTGGATTTAATGAGAGTAATTTTAATTGGGATGCACCTACATCGGCAAAACCCGGTGTTTCCACGGCCTCGATGGCCACCGCTGCCGAAAACGTTGTAATGCATAACGTTCAAATCTCAAACAGCCAGCGCTACGGACTGGCTTGCATATGGCCAAAATTTGTAGAAATAAAGAATTTCAGAACAGTCAACCTCGGTGGGAAAGCCTATGAATCCGGGGACCATGACTCGTATTCAGATCCTCTTTTGCTTAGAATGATCCAAGGTGGCGGGAAAATAGATATTGATGGGTTTAATGCAGTTGGTATCGGATACCCAACATCTCCTATGAGTAGGATTGGAATATCCGCTCAAGATTGCACAGGAACATTTACCTTCTCTTTACGAGATGCTGAAATATTTGGTTTTGAAAGAACGCTTCATTTTGAACATATGGATTATTACTACACCGTTAATATTGATGCACTGGACTCCAAAGGGACTTTTTGTGGTGTCCATGTGACAAGAGGTGCTGGGACAATTAATGTACAACCGAGCATAAATATTGAAAATTCTCAAATAACTGTTTGTAAAAATACATTTTACAAACCTGGAATGTTTGAATTTTCAGAAGCAATTGCCGGATGGGTAAGGGATGCTAGAAGGTCTGATGAAGATGCTAGTTTGGGCGCTGTGTTTAATATTAGTAACACTAAATTAAACATCGGTGCAGGTCTGGACGGTATCGTTTATCCAGTTCCATGGGGTGGAAACGTCAATCTCTCTAACTGTAAGATTAACTATAATAATACCAATTCTGTAAAACAGAGCGGTTACACCCGTATTGAAAATTCGGTTATAACTGGGTTGGGAACAAGTGGAGAATATTTCTTTCCATGGAATCCAACCACTCACCAAGTAACTATTGAACTAGATAATTGTTGGCTTGAACTATCGCCGTTGGCGGATAAAACTAAGTCTGCAAAATTTCATCATAGTTTTGGATTAGTCAAAGGACCCTACGATAACGTTAAAAATTGTAAAATTAGGGGTCATATCAAACTCCCCATTAATGAAAGCGTTGATAGTGGAAACCATTTTTTGTTCTTAGCTAACAACGACCTTGATGCTGCATCTCAAGTGGGATCCCTCTCCTTGACAACAGAAAATACCGGGGAATTCCCTCCCAGGGGGTGTGTAGCACAAGTGGGGTCTGAGGTAATCCCCGCGAGTAAAACAGCAAATAATTTTGTAAAGGGAGGATACGTTGTTGCAAGCGCCGGATTAAAACTAAGGGATATCATGACCGGTCTAAGAACTGGGATATACACCCTTGTTGTGCGTCCAACAACCGGGTCTAGTTCTATCGCTATGGCGGTAGTCTCCCCTATGGATCCAGGGTATGGTAAATGTCTTCAAGTTATTAAAGTGTTATCCCCTACCGTATTTTCTTCTTTGACCCCAGAGAGATTCGGGAGGGATCAAACTCTGGATGGATTAAAAATAGAATTTGATACAACAAATATCCTTTGGTATAAAAATCCAACTGACGGAACAAACGTCGTTAATATTGCCTGGGGACTTTATGCCGGTAATATCTCAGCTGATATATACAAAGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46c31bc53e8adb2153356f89d5d08e0fe83b2e5d8cce34b92e173834f5a42e9b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage CF8 Rai,S., Tyagi,A., Naveenkumar,B.T. and Singh,N.K. 2020-04-30 — GenBank