Protein

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Genbank accession
QXV73583.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MAELPLDQAIPRFKANEDRMNRFVNGDDEATWTTSGGSTEPSISKFLKDKDTEINLQAGGILEQTQTAAGEAEAAQTAAESAQVAAEAAAATLPPIGDDGLIVDIDGVRETKSFDETLTLLDANLRIELGIPPIPLNAIPDFVPLGDTQTLYAGRVSDGGDGKHRHFGDYKRTTRGTRHMFYRKADEHGTGFPGALCYRRRRRGRAWEAEVVLIPAQGAGLNDQRAIIAGVVPGTDRVVVVYSESPQVPTISSRPGPPGDPANYNNSIGPAYLKTFHFDDDGDAFYAGGFTITPATIHTTAYSWFQPFGTIKFHDLDGETVGYFSYFGQFADHEWDDAYRVEVMEVRDNGETFTPTVEEIYSSTVPTYNETAVVRLNRDISFAAGRANSGGLGWFRRTSSGGAWSLLGTLPGTDDQDVAPSLDLAYVNGRPYFVIGSCDRAGSNGIMKFRVAEVDDVYSSPTLFLNVQEASADDMGNASGYQHTIVYPNGDIEWVEFREFVGDNATDIRIVHKRLVDWIEGYFSFVPTVRGATAAGTPTYNTVDTVARVQKVGKRVHYHGRVTLTAKTGMTGQYQISLPYVTKNLQEARAPVTLGYKTGISQTTSTSTPADSDKGFTALCLQNLAWIGIYKDVDSGAATLLNANDSEVAAAHTITFNVIYETN
Physico‐chemical
properties
protein length:663 AA
molecular weight: 72063,99020 Da
isoelectric point:4,87550
aromaticity:0,09955
hydropathy:-0,33092

Domains

Domains [InterPro]
DC_1322
ATT
1–165
DC_1322 G3DSA:2.120.10.10
G3DSA:2.120.10.10
STR
158–508
G3DSA:2.120.10.10
DC_1378
RBD
500–661
DC_1378
QXV73583.1
1 663
Architecture
ATT
STR
RBD
ATT 1-165 | STR 166-520 | RBD 521-661 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV73583.1
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,7137
Central domain 204 474 272 0,6118
C-terminal 475 663 188 0,8580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-474
C-terminal
475-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_30
[NCBI] 		2836126 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV73583.1 [NCBI]
Genbank nucleotide accession
MW980061 [NCBI]
CDS location
range 25133 -> 27124
strand -
CDS
ATGGCTGAGCTTCCTCTTGATCAAGCAATTCCCAGGTTTAAAGCGAATGAAGATCGCATGAACCGTTTCGTCAACGGCGACGATGAAGCTACTTGGACTACTTCGGGCGGGAGTACTGAACCGTCTATCAGCAAGTTTCTGAAGGACAAAGATACGGAAATCAATCTGCAAGCCGGTGGTATCCTGGAGCAAACTCAAACTGCTGCAGGTGAAGCGGAAGCAGCGCAAACGGCGGCCGAGTCTGCACAGGTAGCTGCGGAAGCAGCGGCGGCCACTCTCCCTCCGATCGGCGATGATGGCTTGATTGTCGATATCGACGGGGTTCGCGAAACAAAATCCTTCGATGAGACGCTAACCCTTCTTGATGCCAACCTGCGCATCGAGCTTGGTATTCCACCGATTCCGTTAAACGCAATTCCTGATTTTGTCCCGCTTGGTGACACGCAGACGCTGTATGCCGGCCGCGTGTCTGACGGCGGCGACGGAAAGCATAGACACTTCGGCGATTACAAGCGGACCACCCGCGGCACGCGACATATGTTCTATCGCAAAGCGGATGAACATGGGACGGGGTTCCCAGGTGCATTATGCTACCGTCGTCGTAGGCGGGGAAGGGCTTGGGAAGCCGAAGTTGTACTGATCCCGGCGCAAGGGGCAGGCCTTAACGATCAGCGAGCCATCATTGCCGGCGTCGTACCGGGTACCGATCGCGTAGTTGTCGTATACAGCGAAAGCCCGCAGGTACCTACTATATCTAGTCGGCCGGGACCGCCTGGAGACCCCGCCAACTATAACAATTCAATTGGTCCTGCTTATCTAAAGACGTTCCATTTCGATGATGACGGTGACGCCTTCTATGCTGGCGGGTTCACTATCACCCCGGCGACGATACACACCACGGCTTATTCTTGGTTCCAGCCGTTCGGCACGATCAAGTTTCACGATCTTGATGGCGAGACGGTTGGCTATTTCAGTTACTTTGGTCAATTCGCGGACCATGAATGGGACGACGCATACCGGGTCGAAGTCATGGAGGTGCGCGACAACGGTGAGACGTTCACGCCAACTGTTGAGGAAATCTATTCTTCCACGGTGCCGACGTACAATGAAACTGCCGTGGTGCGCCTCAACCGGGATATCAGCTTTGCCGCGGGTCGTGCTAACAGTGGGGGGCTCGGCTGGTTTCGGCGAACGTCCAGTGGTGGGGCCTGGTCGCTTCTCGGTACGCTACCGGGCACGGACGATCAGGACGTAGCTCCGTCTCTTGATTTAGCTTACGTTAATGGTCGCCCTTATTTCGTGATCGGTTCATGTGACCGGGCCGGGTCGAACGGTATCATGAAGTTTCGTGTCGCGGAGGTGGATGACGTTTACAGTTCTCCGACGCTGTTCCTCAACGTTCAGGAAGCAAGCGCCGATGACATGGGAAATGCGTCGGGCTATCAGCATACGATCGTGTATCCGAATGGCGATATAGAGTGGGTGGAATTTCGCGAATTCGTTGGCGACAACGCGACGGATATCCGGATTGTTCACAAACGTCTTGTCGATTGGATTGAGGGGTATTTTTCGTTCGTTCCGACGGTGCGTGGGGCAACTGCGGCAGGTACGCCTACTTACAACACCGTGGACACAGTTGCACGTGTACAAAAAGTCGGCAAGCGTGTGCATTATCACGGGCGCGTCACGCTGACGGCCAAGACCGGGATGACGGGTCAATACCAGATTTCCCTTCCCTATGTGACAAAGAACCTGCAAGAAGCTCGCGCGCCGGTCACGCTCGGATACAAAACGGGGATCTCTCAAACCACATCGACATCTACGCCGGCCGACAGTGACAAAGGATTCACGGCGCTGTGTTTGCAAAACTTGGCTTGGATAGGGATTTACAAGGATGTCGATAGTGGCGCGGCGACCTTGCTTAACGCGAATGATAGCGAGGTCGCCGCCGCTCACACGATCACGTTCAATGTTATATACGAGACCAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec475c910b22cc5d3df3fc9cb103c6fb77bd6a62d4748a34be938d4350dcb77e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank