Protein

View in Explore
Genbank accession
AUE23054.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MNNTNKHISDEAIYVRFDPIGSNFNSGVKDVQTALALLSPDAVSGTPSATETVQGKIRIGTQEEVNNGVLGDVAVTPKTLELRLQRPQATTDLFGVTRYATNDEALVGTATDRSIVASSLKYVIDWAFTNRTASESNNGVLKLSSTPAAQAGVDDTTAMTPLKTKQAIAAATALIPAYGPATESAMGVVRLATLAQLRDPNIREGFSASPFTLNQWQATESNIGAIKLASQANMDNGSGDTAVTPSKFISQRATTGRVGTTLLANNIGDGSRALSGTAAVLPSDRAAVSTGGVYEGNTSPNQKYMTKGELDTTIPVGGMFMAAFNSDHGNLLIANGRWLPVSGYQTLFQRIGFTYGGNGSDHFALPDMRGVTARGFDAGRGIDAGRGFGTYQEDAQQRIWGNWTIDDQAAWSNYPPDGAYYADGQGTINYDATSRTNRWYALRMHFDSSRVVRTANENRMKNVAINYVIRVI
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50395,42970 Da
isoelectric point:6,14744
aromaticity:0,07839
hydropathy:-0,30953

Domains

Domains [InterPro]
DC_0176
STR
1–419
DC_0176
IPR037053
ATT
303–369
IPR037053
SSF88874
STR
310–471
SSF88874
IPR011083
ATT
318–371
IPR011083
AUE23054.1
1 472
Architecture
STR
ATT
STR
STR 1-302 | ATT 303-371 | STR 372-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CF1 ERZ-2017
[NCBI] 		2267236 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Moonvirus
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUE23054.1 [NCBI]
Genbank nucleotide accession
MG250484.1 [NCBI]
CDS location
range 91814 -> 93232
strand +
CDS
ATGAATAACACTAACAAACACATATCAGATGAAGCGATTTATGTAAGATTTGATCCTATTGGAAGCAATTTTAATTCTGGCGTAAAAGATGTACAAACTGCATTGGCATTGTTGAGCCCCGATGCAGTATCTGGAACTCCTTCTGCCACAGAAACTGTTCAAGGTAAAATTAGAATAGGTACTCAAGAAGAAGTAAATAATGGAGTTCTTGGTGATGTAGCAGTAACTCCAAAAACTCTTGAACTTCGATTACAGAGGCCTCAAGCTACAACAGACTTATTTGGTGTAACTCGTTATGCAACTAACGATGAAGCATTAGTTGGAACTGCAACAGATCGAAGCATTGTAGCTTCATCTTTAAAATATGTGATTGACTGGGCTTTCACGAATAGAACAGCATCAGAATCTAATAACGGTGTTCTTAAATTATCTTCAACTCCAGCTGCTCAAGCCGGTGTAGATGATACTACTGCGATGACTCCTCTTAAAACCAAGCAAGCTATAGCGGCGGCGACAGCTCTTATCCCAGCATATGGTCCAGCTACAGAATCTGCGATGGGTGTTGTAAGATTAGCTACATTAGCTCAATTACGAGATCCTAATATAAGAGAAGGATTCAGTGCATCACCATTTACTTTAAATCAATGGCAAGCTACTGAATCAAATATCGGTGCAATTAAATTGGCTTCTCAAGCTAATATGGACAACGGTTCGGGCGATACAGCAGTAACTCCATCTAAATTTATTTCGCAGAGAGCTACAACAGGACGTGTAGGTACTACTTTATTAGCTAATAATATCGGTGATGGATCAAGAGCATTATCTGGAACAGCTGCTGTTCTTCCATCAGATAGAGCCGCGGTATCAACTGGCGGAGTTTATGAAGGAAATACTTCTCCTAACCAGAAATATATGACAAAGGGCGAATTAGATACGACAATTCCTGTCGGTGGAATGTTTATGGCAGCTTTTAATAGTGATCATGGCAATTTATTGATTGCAAACGGTAGATGGCTCCCTGTATCTGGTTATCAAACCTTATTTCAACGTATTGGTTTCACTTACGGCGGAAATGGATCTGACCATTTTGCTTTGCCTGATATGCGCGGAGTTACGGCTCGTGGCTTCGATGCGGGACGTGGAATTGATGCGGGACGTGGATTCGGAACCTATCAAGAAGACGCTCAACAACGAATTTGGGGTAACTGGACTATAGATGACCAGGCGGCTTGGTCAAATTATCCACCCGATGGAGCATATTATGCAGATGGTCAGGGAACAATTAACTACGACGCCACCTCTAGAACTAATAGATGGTATGCATTACGAATGCACTTCGATTCATCTCGAGTTGTTAGAACTGCAAATGAAAACAGAATGAAAAACGTCGCGATAAACTACGTCATTCGCGTAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c1defcf725729a329aca3e6f6c902c9aeab3d9f9e11d82281d0219737db4539
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank