Protein

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Genbank accession
UGO35886.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVTDKSLTNEEIRAXYFQRDLPIDRHGNFMERIGAQDQGRTGFCALLHYHLIEGMSDKEALARMKLYEMSEIEANFTLKRTKEFIANVLEIDLDEIRGNLKSTARYIYEDVQKMLLELDHRYEDERHGYIEFEGSHFQADESSRTILGQYIQADTAPEYWLDTLNTKHSPFTVAQCKALLAAIVARDQVLHSAMADNKRQIRELAEKRDYTGLKTLSESLGM
Physico‐chemical
properties
protein length:223 AA
molecular weight: 25688,71430 Da
isoelectric point:5,31896
aromaticity:0,08559
hydropathy:-0,55180

Domains

Domains [InterPro]
DC_0377
STR
7–119
DC_0377 IPR025484
UGO35886.1
1 223
Architecture
STR
STR
STR 7-119 | STR 121-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_Lh1B
[NCBI] 		2894591 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO35886.1 [NCBI]
Genbank nucleotide accession
OK428535.1 [NCBI]
CDS location
range 137662 -> 138333
strand -
CDS
ATGTCTGTTACTGACAAAAGCTTAACGAACGAAGAGATCCGCGCCMGTTATTTCCAGCGTGATTTGCCGATTGATCGTCACGGTAATTTCATGGAACGAATCGGTGCGCAGGATCAGGGTCGTACCGGATTTTGTGCATTACTCCATTACCATCTCATCGAAGGGATGTCTGATAAAGAAGCCCTGGCACGCATGAAGCTGTATGAGATGTCGGAGATTGAAGCTAACTTCACATTGAAACGCACGAAAGAGTTTATTGCTAATGTGCTGGAGATTGACCTCGACGAAATTCGCGGGAATCTGAAATCTACCGCACGTTACATTTACGAAGACGTGCAGAAGATGCTGTTGGAACTCGACCACCGCTACGAAGATGAGCGCCATGGTTATATCGAGTTTGAAGGTAGTCACTTTCAAGCCGATGAATCGTCGCGTACCATCCTCGGTCAATACATTCAGGCAGATACCGCACCAGAATACTGGCTCGATACGCTGAATACTAAGCACAGTCCGTTTACAGTAGCCCAATGTAAAGCGTTGCTGGCCGCTATTGTTGCACGTGACCAAGTGTTGCACTCAGCAATGGCAGATAACAAACGCCAAATCCGTGAGTTAGCTGAAAAGCGCGATTACACCGGATTAAAAACATTGTCCGAGTCACTCGGCATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef9b55c557782479f2dba4ca95903fab07d3f39699fab295d892f09445587c72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic properties of vB_EcoM_Lh1B Alexyuk,M., Bogoyavlenskiy,A., Alexyuk,P., Moldakhanov,Y. and Berezin,V. 2022-10-28 — GenBank