Protein

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Genbank accession
YP_010001918.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPGVRFRATRRRPSGLITFDNSTVLDGSATTSFGLTVGGSNATIIVFAAGNLTNAATVDGVAMTLIGKSSNAAMWAITGLAAGARNVVVTRAAATSYIVSAMSYLGAASFAGGVVNSGTGTAMSSAPTGGQLKVAGFDFSSSSADFAGITTDGTQRVKYRRVNGNNVLVADKPTGPIGATLVGSSSWTSIGVSLAA
Physico‐chemical
properties
protein length:197 AA
molecular weight: 19578,87660 Da
isoelectric point:10,60661
aromaticity:0,06599
hydropathy:0,34264

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010001918.1
1 197
Domain Start End Length (AA) Confidence
N-terminal 1 43 43 0,0058
Central domain 44 186 144 0,0236
C-terminal 187 197 10 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-43
Central
44-186
C-terminal
187-197

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Gaea
[NCBI] 		2483669 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010001918.1 [NCBI]
Genbank nucleotide accession
NC_053238 [NCBI]
CDS location
range 35289 -> 35882
strand +
CDS
GTGATCCCGGGCGTACGGTTCCGGGCGACACGGCGGCGGCCGTCAGGGCTGATAACGTTCGACAACTCGACCGTGCTCGACGGCTCGGCCACGACTAGTTTCGGTCTCACCGTCGGTGGTTCCAACGCGACAATCATCGTGTTCGCCGCCGGCAACCTCACCAACGCGGCGACCGTCGACGGCGTCGCAATGACGCTGATCGGCAAGTCGAGCAACGCCGCCATGTGGGCGATCACCGGACTCGCCGCAGGCGCCCGCAACGTCGTCGTGACGAGGGCCGCGGCGACCTCGTACATCGTGTCAGCCATGTCCTACCTCGGCGCGGCATCTTTTGCCGGCGGCGTCGTCAACAGCGGCACCGGCACCGCGATGTCGTCGGCGCCGACGGGCGGGCAGTTGAAGGTCGCCGGGTTCGACTTCAGCTCATCGTCGGCCGACTTCGCCGGCATCACTACCGACGGCACTCAGCGTGTCAAGTACCGGCGCGTCAACGGAAACAACGTGCTGGTGGCCGATAAGCCGACAGGGCCGATCGGCGCGACGCTTGTCGGGTCGTCGAGCTGGACGAGTATCGGCGTGTCGCTGGCGGCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ebc268e6678cb5259c0eebb53cb298121445c3f3390f998a253d4f645be53123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9176
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50