Protein

View in Explore
Genbank accession
UVD31725.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSNEYYNFINPAEAGTIVDPFDYNREMEKITEAFSVVPPASQLTSGTLNYSTDTGTGNDHIATLDDFDTDYVAGSNVALRINDASTGPSTLSVNDLAAKNVTLSVFGAVAAGDLFAEGVYTFVYNGERFQILEMGARYYTTAFEQLSIAQAKAALAAASEATALSERNVAAASAANALASANAITASKDSAAGSATAASGSATAASGSATAAANSASAANTSAGNAASSATAAANSATAAANSATASDASATAAANSATAAAGSAADAATYAQEAIDIVNAPNFLDRVQAAILELELFPGCTEFFDADIDPNVKYPGTTWVRLPASTSLRMSNATGSDVNGTTGADSVTLSTNNLASHNHSVTMGTVSSTDLGTDTLASVDLGTDTLDNTTIAAKTTSSFDYGTKTTSGYDPSAITTSGAGGHNHTFTAYTVDGPGARLRAAANDSTSAGNVTTSSADNHTHTLDLGAHTHTVALGAHTHTFPVGSHTHTVALGAHSHTVAYGSHGHSATLSLSNTGSGTSFGVVESSLILVAWYRSA
Physico‐chemical
properties
protein length:538 AA
molecular weight: 53981,59390 Da
isoelectric point:4,60279
aromaticity:0,06506
hydropathy:-0,04517

Domains

Domains [InterPro]
DC_2096
ATT
2–223
DC_2096
DC_0423
STR
203–534
DC_0423
UVD31725.1
1 538
Architecture
ATT
STR
ATT 2-223 | STR 224-534 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pondi
[NCBI] 		2972476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD31725.1 [NCBI]
Genbank nucleotide accession
OP136151.1 [NCBI]
CDS location
range 55282 -> 56898
strand -
CDS
ATGAGTAACGAATATTACAACTTTATTAATCCGGCTGAAGCGGGTACGATTGTCGACCCGTTCGACTACAACCGTGAGATGGAAAAGATCACCGAGGCTTTCTCGGTGGTCCCGCCTGCTTCCCAGTTAACTTCCGGTACCCTGAACTACTCAACGGATACGGGTACCGGGAACGATCACATCGCCACGCTGGATGACTTTGATACCGACTATGTTGCCGGGAGTAACGTTGCGCTCCGAATCAACGATGCGTCTACCGGACCGTCTACCCTGAGCGTAAACGACCTGGCCGCTAAAAATGTCACGCTGTCAGTGTTTGGTGCGGTGGCAGCAGGTGACCTGTTTGCCGAAGGTGTCTACACATTCGTCTATAACGGTGAGCGTTTCCAGATTCTGGAGATGGGTGCACGCTATTACACTACCGCCTTTGAGCAGCTTTCAATTGCCCAGGCTAAGGCAGCGCTCGCGGCGGCCAGTGAAGCTACGGCACTGAGTGAGCGTAACGTAGCAGCGGCGTCAGCAGCGAATGCTCTAGCGTCAGCAAACGCTATCACCGCGTCCAAAGATTCAGCAGCAGGTAGCGCCACGGCAGCGTCCGGCAGCGCCACGGCAGCGTCCGGCAGCGCCACGGCAGCGGCAAACTCTGCGTCTGCGGCAAACACATCTGCGGGTAACGCCGCCAGCAGCGCCACGGCAGCGGCGAACTCTGCGACGGCAGCGGCGAACTCTGCTACGGCTTCCGACGCCAGCGCAACGGCAGCGGCAAACTCCGCAACGGCAGCGGCAGGTAGTGCGGCGGACGCGGCAACTTACGCGCAGGAAGCTATCGACATCGTTAACGCGCCGAACTTTCTCGACCGCGTGCAGGCGGCTATTCTTGAACTGGAACTGTTCCCCGGCTGTACCGAGTTCTTTGACGCTGACATCGATCCTAACGTTAAGTATCCGGGTACCACATGGGTACGCTTACCAGCGTCGACATCATTACGTATGTCCAACGCCACGGGCAGTGACGTTAACGGAACGACAGGCGCTGACAGTGTGACGCTTTCGACAAACAACCTGGCCTCGCACAACCATTCAGTGACAATGGGTACCGTGAGCAGCACCGACCTGGGTACCGACACTCTGGCATCTGTTGACCTGGGTACCGACACTCTGGATAACACTACCATCGCAGCGAAAACCACATCCAGCTTCGACTACGGTACCAAAACCACATCAGGTTACGATCCTAGTGCTATCACCACCAGTGGTGCTGGCGGTCACAATCACACGTTCACTGCGTATACAGTCGACGGACCGGGAGCGAGATTACGCGCAGCAGCAAACGACTCTACGTCAGCGGGTAACGTCACCACATCAAGTGCTGATAACCACACGCATACACTCGACCTCGGTGCGCACACGCACACTGTAGCTTTAGGTGCGCACACTCACACCTTCCCGGTCGGCAGTCACACGCACACTGTAGCTTTGGGAGCGCACAGCCACACAGTGGCTTACGGCAGTCACGGACATAGTGCCACATTGTCGTTAAGCAACACTGGTTCCGGTACGTCCTTTGGCGTGGTAGAATCGTCTCTAATCTTAGTTGCATGGTACAGGAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a60ac0a168039932e42f2211c8eea2fb2ee0fc2cabba5e962cf60b00fb6de77a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A flexible and efficient microfluidics platform for the isolation of novel bacteriophages Sidi Mabrouk,A., Ongenae,V., Claessen,D., Brenzinger,S. and Briegel,A. 2023-01-31 — GenBank