Protein

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Genbank accession
QDJ96408.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MTEYTVKYTDKNKAPIVVSETNVDNSSTDLSLFGRKRLEYGRDMNANFLHLLENFACKENPLLPGNPDLTSTSFIADTTKRLLTKPVQGQLWYNITQESLYAWTGSSWLALGMVGDIASNWGVIAHGSQLPKPQNQHGYVFDYDECAWIVTPFVMDTSFTYLQCVTDDQANVTMFYNPEGGTSAVFGCANYLIVGIKGNKNLGSQLPIPSATPAPSPTPTMTPTRTSTPVVSPTPSVTPTAGVSPTPTPTMTRTGTPAPSLTPSVTQLVYSTTITANPTGQVLPGAQICYTVSLNHPAPATGYSFTFTRSGDFSNVCASTANETAGPVLDTTQAFIPPNQSSLQICRPAPQPATPTPTPTAAPRYACRNMPGTPPLNGFNGGYCTGFVASSVPGGTFTTFTNSSGGNGDYNQCTSYCACNNATSFVSTQTIALNPVRGNVQYYNATPAIQLNLKVTLNGVGETPYNRQVYGTTAQTVTDTITVGSRTFTITINMTPVLVSSSGNNRTWQIASDYTIVDNETGQVLGTC
Physico‐chemical
properties
protein length:528 AA
molecular weight: 56244,29140 Da
isoelectric point:5,60168
aromaticity:0,08902
hydropathy:-0,21288

Domains

Domains [InterPro]
DC_1317
STR
85–295
DC_1317
QDJ96408.1
1 528
Architecture
STR
STR 85-295 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp13
[NCBI] 		2591401 No lineage information
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDJ96408.1 [NCBI]
Genbank nucleotide accession
MN047793 [NCBI]
CDS location
range 131854 -> 133440
strand -
CDS
ATGACAGAATATACCGTTAAATATACCGACAAGAATAAAGCTCCTATTGTAGTATCGGAGACCAACGTTGATAATTCGTCAACTGACCTTTCGTTGTTTGGTAGAAAGCGACTAGAATATGGTCGTGATATGAATGCTAACTTTCTCCACTTGCTGGAGAATTTTGCGTGCAAAGAAAACCCCCTATTACCGGGTAATCCTGACTTAACCTCAACATCATTTATTGCTGATACTACTAAACGTCTATTGACAAAGCCAGTTCAGGGACAACTTTGGTACAATATTACTCAAGAATCATTATATGCTTGGACGGGTTCATCATGGCTAGCATTAGGTATGGTAGGAGATATTGCATCTAACTGGGGCGTAATTGCACATGGTAGCCAATTACCTAAACCACAAAACCAGCATGGTTATGTGTTTGATTATGATGAATGTGCATGGATTGTAACGCCATTCGTTATGGACACCAGCTTTACATACCTACAGTGTGTAACGGATGACCAAGCAAATGTAACTATGTTCTATAATCCTGAAGGTGGCACCAGTGCTGTATTTGGATGTGCCAACTACCTGATCGTAGGTATTAAGGGTAATAAGAATTTAGGCTCACAATTGCCAATTCCTTCTGCTACTCCGGCCCCATCACCAACTCCAACGATGACGCCGACACGTACATCTACGCCAGTAGTATCACCAACTCCATCAGTAACACCAACGGCAGGTGTATCACCGACACCAACACCAACAATGACTCGTACTGGTACACCAGCACCATCGTTAACGCCGTCAGTAACTCAATTAGTTTACTCTACGACTATTACTGCTAATCCTACTGGTCAAGTTCTTCCTGGCGCACAGATTTGTTATACAGTTTCCTTGAATCATCCTGCACCAGCTACTGGATATTCATTTACATTCACTCGTAGTGGTGATTTCTCCAACGTATGTGCATCTACGGCAAACGAGACAGCTGGCCCGGTATTAGACACAACTCAAGCGTTCATTCCCCCGAACCAATCAAGCCTTCAGATTTGTCGCCCAGCACCGCAACCAGCAACTCCGACACCAACTCCGACAGCCGCACCGCGTTATGCATGTCGTAATATGCCGGGTACTCCACCGCTAAACGGCTTCAATGGTGGATACTGCACAGGTTTCGTAGCGTCATCTGTTCCTGGCGGAACATTCACCACATTCACCAACTCATCAGGTGGTAATGGTGATTATAACCAGTGTACGTCATACTGTGCTTGTAATAATGCCACATCGTTTGTGTCTACGCAGACTATCGCATTGAATCCAGTAAGAGGAAATGTACAATATTATAACGCTACACCAGCTATTCAATTAAACCTGAAAGTTACATTAAATGGTGTAGGTGAAACTCCGTATAATCGTCAAGTTTATGGTACAACAGCACAAACAGTTACTGATACTATTACTGTAGGCTCCCGTACATTCACGATTACTATTAATATGACTCCAGTATTAGTAAGTAGTAGCGGTAATAACCGCACTTGGCAGATTGCTAGTGACTATACTATTGTGGATAACGAAACCGGTCAGGTACTGGGTACTTGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
efd34e11079229d2b21bf8242b789c180a9b09a198ccd8bac6d06e9a0c802d05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequence analysis of a novel phage Xoo-sp13 that infects Xanthomonas oryzae pv. oryzae Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2021-02-14 — GenBank