Protein

View in Explore
Genbank accession
URP86286.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTASVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQAARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGSGSLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDLYGFHTYGLWSIGNDVYLGDIFKFTGDLYCSKELRDAGGEVHLYMWTENGSGQWITSSILRTTGLAPDQWHSLSGYFTIPTDPLNARMGSQVYHYPSTVKVGLAQCRNVQITKVPREEINRNGAAVGVNGVRMQTLSEVDSSGNENPIDKLLSLPVSPTGVVSDKKIISHNFAELDYIVSDPVEYTSTSTTEYQFKEWTATQQAAVTKASLSSYGLKAGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYISGINMRDVGTIPNVYSFYKNEGVVPAGAVTFDFGLYRYPNSTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 58388,79710 Da
isoelectric point:5,32254
aromaticity:0,10943
hydropathy:-0,21774

Domains

Domains [InterPro]
DC_0004
STR
1–530
DC_0004
PS52031
LEC
24–205
PS52031
IPR039477
STR
62–132
IPR039477
URP86286.1
1 530
Architecture
STR
STR 1-530
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URP86286.1
1 530
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,3319
Central domain 74 314 242 0,6122
C-terminal 315 530 215 0,5816
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-314
C-terminal
315-530

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EC-F2
[NCBI] 		2662273 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP86286.1 [NCBI]
Genbank nucleotide accession
MN508624 [NCBI]
CDS location
range 43112 -> 44704
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAGTGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATTAACAGACGAACACAAGCTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAAGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGACGATAACTTTTTAGCAACAATGAGGAAAATAGGTTCTGTTGCGTGGCCTGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAACTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCCACGATGAAAAAGATCTGTATGGAAAACTTTGTCGGTGGTTCTGGTAGTCTGAAAGACAATACAACGAGTTTTGTTGAAGTTGTGTTTGATGAATTCAGTGATATCGGGGTAACGGGTATTCCAGAAAGAATGGTTGATGATGTTCAGACATACCAGAACAGCGGGGATCTTTACGGCTTCCATACTTACGGGCTATGGTCAATTGGTAATGATGTTTATCTGGGTGATATCTTCAAATTCACTGGGGATTTGTATTGTTCTAAAGAACTCCGTGATGCTGGGGGAGAAGTTCACCTGTATATGTGGACAGAAAACGGTAGCGGACAATGGATCACGTCATCCATTCTTCGAACAACCGGACTAGCCCCCGATCAGTGGCATTCGTTATCAGGATATTTCACCATCCCGACCGATCCGCTAAATGCTCGAATGGGTTCACAGGTATATCATTACCCGTCAACTGTTAAAGTCGGGCTGGCGCAATGTCGTAACGTCCAGATCACAAAAGTACCGCGTGAAGAAATAAACCGCAATGGTGCTGCTGTTGGTGTGAATGGTGTTAGAATGCAGACACTTTCCGAAGTGGATTCAAGCGGAAATGAAAACCCGATTGATAAATTGCTTTCTCTGCCTGTTTCGCCTACTGGTGTTGTCAGTGATAAGAAAATCATTTCACATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATACACTTCAACCAGTACAACAGAATATCAGTTTAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCATCACTAAGCAGTTATGGCTTAAAAGCTGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCAAACGCAATCGCCAACAATAAAGGTGCATATATCGTAATGCAGTTCTGGGACGCGAATAATACGTATATTTCAGGGATCAACATGCGTGATGTTGGTACGATACCTAACGTATATTCATTCTATAAAAACGAAGGTGTTGTTCCTGCTGGGGCGGTTACTTTCGATTTCGGTTTATATCGTTATCCAAACAGCACAAACATCGGTACGGTATCCGCTAAAGACGTTAAACTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
584b709390c7c0afbf8d8d090483c409e17af2093f34f5088c4f93a7293b57ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections Gibson,S.B., Green,S.I., Liu,C.G., Salazar,K.C., Clark,J.R., Terwilliger,A.L., Kaplan,H.B., Maresso,A.W., Trautner,B.W. and Ramig,R.F. 2019 — GenBank