Protein

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Genbank accession
QHJ73755.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANHLAYTHLYMFIVAVTMELIFNVEKQVMARTDSLVIASHSRKVHSCSFTFSEEWQDMEKSATFKKNHITYDVLLDNDTCTIPSEVLRSAGAFEVGVYGSDGQRTITSNLVSVEVVAGSPTEGVESRITPSLYEQIIKKINEVKKGEVEPELILEAVNEYLVEHPLDDVVVDEVAAYVTEHASELKGEKGDKGDRGEKGDTGAAGVQGIQGIQGEKGAKGDTGAVGKSAYQIAVENGYSGTESEWLASLKGEKGEQGEQGIQGNKGDKGDKGDKGDKGDAGATYDDTKIKQDIADIWKVQGEVGVKNLIPYPYTQLASQIAGVSIVSNEDGSITLNGTADKDIYGLLAIKDFGNSVFSSKYKPNIPYVAILLNGTNDIYLSYNKDYKKVELVVTRGTEINNVTVYPMICYKAYANDDTYVPYAKTNRELTDENSARKAENDSKIQDIWYAQGKYGVKNLIPFPYKDKNGKNTNGITFTVNDDGSITSNGTATGWAAFYFVQSSIGGFSLDKGKYILSYDASSDTTFSIQFIIVDGNGTSLLIRGVYGKRGYIEFEITDEIVQLFKTSSVQILIYANKGAVVNNVTIYPMIRLASDADDTWQPYAPTNYQLNQKLDIAAGVYLPNATNINSKKVLASVGQTSVTFAVNGFMSRYNVTSSDLDLDISAETSSGDIVSYNNVNITGGIVTVTFDALAEQTTFICKCSVIQ
Physico‐chemical
properties
protein length:708 AA
molecular weight: 77044,15900 Da
isoelectric point:4,80354
aromaticity:0,09181
hydropathy:-0,28319

Domains

Domains [InterPro]
DC_1822
STR
11–250
DC_1822 G3DSA:1.20.5.320
IPR050938
Unmapped
185–292
IPR050938
DC_1725
STR
204–455
DC_1725
QHJ73755.1
1 708
Architecture
STR
STR 11-455 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHJ73755.1
1 708
Domain Start End Length (AA) Confidence
N-terminal 1 324 324 0,9571
Central domain 325 525 202 0,5179
C-terminal 526 708 182 0,4922
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-324
Central
325-525
C-terminal
526-708

Taxonomy

  Name Taxonomy ID Lineage
Phage Butyrivibrio virus Ceridwen
[NCBI] 		2696359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Butyrivibrio fibrisolvens DSM 3071
[NCBI] 		1121131 Bacillota > Clostridia > Lachnospirales > Lachnospiraceae > Butyrivibrio > Butyrivibrio fibrisolvens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHJ73755.1 [NCBI]
Genbank nucleotide accession
MN882553.2 [NCBI]
CDS location
range 17202 -> 19328
strand +
CDS
ATGGCGAATCATCTTGCATATACACATTTGTATATGTTTATAGTAGCAGTGACTATGGAGCTTATATTTAACGTAGAAAAACAGGTAATGGCAAGGACAGATAGCCTTGTAATTGCTTCACATAGTAGAAAAGTGCATTCCTGTAGCTTCACATTTTCCGAGGAATGGCAGGACATGGAGAAAAGCGCCACATTCAAGAAGAATCATATCACTTATGATGTTCTGCTTGATAATGATACCTGCACAATCCCTAGTGAGGTATTAAGAAGCGCAGGAGCTTTTGAAGTAGGCGTATATGGCAGTGATGGACAGCGTACAATCACATCTAACCTTGTATCGGTTGAAGTGGTCGCAGGTTCGCCAACTGAGGGAGTAGAAAGCAGAATAACACCTTCACTTTATGAGCAGATCATTAAGAAAATTAACGAAGTGAAAAAGGGCGAAGTTGAGCCAGAACTTATTCTTGAAGCTGTTAACGAATATCTGGTTGAACATCCTCTCGATGATGTAGTAGTGGATGAAGTAGCCGCTTATGTTACCGAACATGCTAGTGAGCTAAAAGGTGAAAAGGGTGATAAAGGTGATAGGGGAGAAAAAGGCGACACAGGAGCAGCAGGAGTGCAAGGAATACAAGGCATTCAAGGCGAAAAGGGAGCAAAAGGCGATACGGGAGCAGTCGGTAAATCGGCTTATCAGATAGCGGTTGAGAATGGTTATAGCGGCACAGAATCTGAATGGTTAGCATCTTTAAAGGGTGAAAAAGGAGAACAGGGAGAGCAAGGCATACAAGGAAATAAAGGGGATAAGGGAGATAAAGGTGATAAAGGTGACAAAGGCGATGCAGGCGCAACCTATGACGATACCAAGATAAAGCAGGATATAGCTGATATATGGAAAGTACAAGGGGAGGTAGGTGTAAAAAACCTTATTCCTTATCCTTATACACAATTGGCTTCTCAGATTGCGGGAGTATCTATTGTTTCAAACGAAGATGGTAGTATAACATTAAATGGTACAGCCGATAAGGATATTTACGGATTATTGGCAATCAAAGATTTTGGAAATAGTGTCTTTTCTAGCAAATATAAACCAAATATACCTTATGTAGCTATATTGCTGAATGGAACTAACGATATATATTTAAGTTATAACAAGGACTACAAAAAAGTAGAATTGGTTGTTACGCGAGGTACAGAAATTAACAATGTTACTGTATATCCAATGATTTGTTATAAGGCATATGCTAATGATGACACATATGTTCCATACGCTAAAACCAATAGAGAATTAACGGATGAAAATTCAGCTCGCAAAGCAGAAAACGATAGTAAAATTCAAGATATATGGTACGCACAAGGTAAGTATGGCGTTAAAAACCTTATACCGTTCCCTTATAAGGATAAAAATGGCAAGAATACTAATGGCATAACTTTTACAGTAAATGACGATGGTTCAATAACAAGTAATGGAACTGCGACAGGTTGGGCGGCTTTTTATTTCGTGCAGTCTTCAATTGGTGGCTTTTCGTTAGATAAAGGTAAGTATATATTATCTTATGACGCTTCATCTGATACGACTTTTTCTATTCAATTTATTATAGTTGATGGTAACGGAACAAGCTTATTAATTCGTGGTGTCTACGGAAAAAGGGGATATATTGAATTTGAAATCACTGATGAAATTGTTCAGCTTTTCAAAACTTCAAGCGTTCAAATACTTATCTATGCAAACAAAGGCGCAGTTGTAAATAATGTAACGATTTATCCGATGATACGCTTGGCATCAGATGCAGACGATACATGGCAACCTTATGCCCCTACCAATTATCAGCTCAATCAAAAGCTTGATATAGCCGCAGGAGTATATCTGCCAAATGCCACTAATATAAACTCTAAAAAGGTATTAGCAAGCGTAGGGCAAACAAGTGTTACATTTGCTGTTAATGGTTTCATGAGCCGATACAACGTCACATCATCAGATTTAGATTTGGATATATCAGCAGAAACATCGAGTGGTGATATCGTATCTTACAATAATGTAAATATAACAGGTGGTATCGTTACAGTAACCTTTGATGCGTTGGCAGAGCAGACAACTTTCATTTGTAAGTGTTCAGTAATACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b85315d836010139ab5ad487eac228b332b9be0f05c1fd82f82df0e636f33c48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequencing of Six Novel Lytic Bacteriophages from the Rumen Active Against Butyrivibrio fibrisolvens Friedersdorff,J.C.A., Kingston-Smith,A.H., Pachebat,J.A., Rooke,D. and Creevey,C.J. 2020-07-14 — GenBank