Protein

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UniProt accession
A0A8S5MYA4 [UniProt]
Protein name
Baseplate wedge protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSNKIKLKRGLSSKVSSITLDEGELALTLDTNKLYTNKGQISPDNVYVGDTEPTDSNVKCWISPSGKIDLSSLWDQIYPVGSIYITVNATNPSVLFGGTWEQLKGKFLVGVDSSDADFKISGKTGGEKAHKLTVEEMPKHNHTENYVGVDWYQHGTSGDWNISSTSSPFRVTGDTGGDKPHNNLPPYMAVYMWKRIS
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21677,00190 Da
isoelectric point:6,19382
aromaticity:0,09137
hydropathy:-0,53401

Domains

Domains [InterPro]
DC_0294
STR
2–197
DC_0294
IPR053827
ATT
74–196
IPR053827
SSF88874
STR
77–195
SSF88874
cd22641
STR
103–196
cd22641
A0A8S5MYA4
1 197
Architecture
STR
ATT
STR 2-73 | ATT 74-197
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5MYA4
1 197
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9426
Central domain 30 186 158 0,0284
C-terminal 187 197 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-186
C-terminal
187-197

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctdxZ3
[NCBI] 		2826401 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD87184.1 [NCBI]
Genbank nucleotide accession
BK015016 [NCBI]
CDS location
range 16 -> 609
strand +
CDS
ATGAGTAATAAAATTAAACTTAAAAGAGGCCTATCATCTAAAGTCAGTTCTATTACATTAGATGAAGGAGAATTAGCTCTTACTCTTGATACTAATAAGCTTTATACTAATAAGGGACAAATTTCTCCAGACAATGTATACGTTGGAGATACTGAGCCTACAGATTCGAATGTAAAATGTTGGATTTCTCCATCTGGTAAAATAGACTTGAGTTCTCTATGGGATCAAATATATCCTGTTGGTTCTATTTATATTACTGTAAATGCGACTAATCCTTCAGTATTATTTGGTGGAACTTGGGAACAGTTAAAAGGTAAATTTTTGGTTGGCGTTGATTCATCTGATGCAGATTTCAAAATTAGTGGAAAAACAGGTGGAGAAAAAGCACATAAGTTAACAGTTGAAGAAATGCCAAAACATAATCATACAGAAAACTATGTTGGCGTTGACTGGTATCAGCACGGAACAAGTGGTGATTGGAACATTTCTTCTACATCAAGCCCATTTCGTGTAACCGGTGATACCGGAGGAGACAAACCACACAATAATTTGCCACCGTATATGGCAGTTTACATGTGGAAAAGGATTTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8b1c3aea6ee38ce0612277e3d33442f4c6cadb7c77c8c7fa1cb6e0bb2cdd37ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50