Protein

View in Explore
Genbank accession
BBI57599.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MERFMAEFGQGYVQVPTLSENNAVRYKLSIAGSCTKSTTKAYVKFQDGNFGSQNFQNGLNLIEIDVSAEPKIVANKTYSFTKDFDVISEAFITYINSIPANRIVCLVSSGRLNASQKLIDWFHAAGSTAFPTKWLIDRFEPSYSAFYVSGRNAIVMEHVLYNDGVLIEDVSTPLEVVFDDISDVGGTGYPVRIVEDENTYLSNDGDEIKRFPTESPTTPLTDYNMKPGEFFYLKFQLMCDQALKDVGTSQMSVRFFNASGALTGTVNMDVPSNVPAGAWMTFERVVMVPEGTTDFTLYARKTASAGQGGVRNVMFGEISESEPQPKPAEFGVNGIRMNFGTETKNMGTTIAQLYDKTGTKPGQVWVAEFREKY
Physico‐chemical
properties
protein length:373 AA
molecular weight: 41339,09650 Da
isoelectric point:4,87806
aromaticity:0,11796
hydropathy:-0,23887

Domains

Domains [InterPro]
DC_0912
STR
1–373
DC_0912
PS52031
LEC
22–193
PS52031
IPR039477
STR
57–130
IPR039477
BBI57599.1
1 373
Architecture
STR
STR 1-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBI57599.1
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,4071
Central domain 173 362 191 0,4029
C-terminal 363 373 10 0,5979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-362
C-terminal
363-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KIT01
[NCBI] 		2382092 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI57599.1 [NCBI]
Genbank nucleotide accession
AP019521 [NCBI]
CDS location
range 157227 -> 158348
strand +
CDS
ATGGAAAGATTTATGGCAGAATTTGGACAAGGATATGTCCAGGTTCCTACATTATCTGAAAACAATGCTGTAAGGTATAAACTTAGTATAGCGGGTAGTTGTACTAAGTCTACCACAAAAGCATATGTTAAATTTCAAGATGGGAACTTCGGTTCCCAGAATTTTCAAAATGGATTAAACCTTATAGAAATCGATGTTAGTGCTGAACCCAAAATAGTGGCTAACAAAACTTATAGTTTTACAAAAGATTTTGATGTTATTTCTGAAGCTTTTATAACGTATATAAATTCTATACCAGCCAATAGAATAGTTTGTTTAGTATCTTCTGGTAGATTAAATGCTTCACAAAAACTTATTGATTGGTTCCATGCAGCAGGAAGTACCGCATTCCCGACTAAATGGTTAATAGACCGGTTTGAGCCATCTTATTCTGCATTTTATGTTTCAGGAAGGAATGCTATAGTAATGGAACATGTGCTTTATAATGATGGGGTATTGATCGAAGATGTTTCTACTCCATTAGAAGTGGTATTTGATGATATCAGCGACGTCGGTGGTACAGGATATCCTGTCAGAATTGTTGAAGATGAAAACACTTATCTAAGCAATGATGGAGATGAAATTAAGAGATTTCCTACCGAATCTCCTACCACCCCATTAACAGATTATAATATGAAACCAGGTGAATTCTTTTACCTTAAGTTTCAATTAATGTGCGACCAAGCTTTAAAAGACGTCGGGACCTCTCAGATGTCTGTTAGATTTTTTAATGCCTCAGGTGCTTTAACCGGGACAGTTAATATGGACGTTCCTTCCAACGTTCCTGCTGGTGCATGGATGACATTTGAACGAGTAGTAATGGTTCCTGAAGGTACTACAGACTTCACCCTTTATGCCAGAAAAACAGCTTCGGCCGGACAAGGTGGAGTTCGAAATGTTATGTTCGGTGAGATATCTGAATCAGAACCTCAGCCAAAACCTGCTGAATTTGGTGTTAACGGTATTCGTATGAACTTTGGTACAGAAACTAAAAATATGGGTACTACCATAGCCCAGCTATATGATAAAACAGGTACTAAACCTGGTCAGGTTTGGGTCGCTGAATTTAGAGAAAAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e695028e5e63e08b6985179bc2c65591c446476b303e9159c9dd1a242ac2df10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6715
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage KIT01, a JS98virus, infected both Escherichia coli and Salmonella enterica Pham-Khanh,N.H. and Kamei,K. 2019-07-24 — GenBank