Protein

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Genbank accession
GENB_7e9b36289f23 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIRTTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
Physico‐chemical
properties
protein length:527 AA
molecular weight: 60931,03070 Da
isoelectric point:5,65704
aromaticity:0,11765
hydropathy:-0,54535

Domains

Domains [InterPro]
G3DSA:6.20.110.10
ATT
4–90
G3DSA:6.20.110.10 G3DSA:3.55.50.40 DC_1309 DC_0297
IPR044051
ENZ
18–92
IPR044051 IPR010572
GENB_7e9b36289f23
1 527
Architecture
ATT
STR
ENZ
RBD
ATT 4-90 | STR 91-377 | ENZ 378-486 | RBD 495-527
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_7e9b36289f23
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,7961
Central domain 232 436 206 0,5062
C-terminal 437 527 90 0,0031
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-436
C-terminal
437-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage ECel-2020f
[NCBI] 		2777215 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CP062442.1_CDS_[14876..16459] [NCBI]
Genbank nucleotide accession
CP062442.1 [NCBI]
CDS location
range 14876 -> 16459
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
ee9cb69762ff3584b8eb038cb1b6bca2d77e91269794adb5b2946e29d7ab730b

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8905
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50