Protein

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Genbank accession
XYC70114.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADSCAQYVSTDDLKAAKESILHIEHVATSKDANGNPALVVTDPIRGNDVTNTTLDGLFSDIGFKPVNGSFEDGGTLVNRWDVLLYETNGSFYQWTGAIPVGGLVVSAGSSPFDSGGNLLPGWMDQTDLTLRTDLAATTGAGLVGFNSASSYPTGTIGDFVDSAVNYSTPQMYGVEPNSSVSFGTALDAMFAAGGDIRFEKPGTYITDHSLILVSGTRLWIGPGVTIKLANASNVPVFKNYAYANSAAVDAYIEIWGPGTIDYNGANQTVVGLGSMASILKGIISLKIGGGIKVINANKYAWLVCNITYFTADGLNFDTISDGLHCQPPIRHSYIRNLKGKTGDDMLAFTIGDYANYNISEPGDFSNVDVAGLFCESALCAVKITGDGTGNFVRFRVSGIYGDTLHAVFRVWGDTNLTKTTVKNLTIEDVHAIPGSACDTIEIDDRGFGTSGYSIEIDEIHIKNVYTVNNTQQTVKFAGTFGSVIHSLVLENLPRNALTILGVNNAGTVAIDNVTIKNGNVIFPDNANAAVVVNRGTIGNMNIEDVSCNFVSTSNGQVARLIAGCTVTRANWVNVYQLRGQRGWNHITSAMTGGTELNLTNYTCDGEGRIAQVTGSTLTVRMSNCRRINDTGSQTAFFASGGTITLSGSLETGFNVVGTNSGGVIKTTPGVHNISCNVDLLTSVDGSSVQNLNGSLACGVGRVLVQTKVWKNLFSGATYTSSI
Physico‐chemical
properties
protein length:723 AA
molecular weight: 76327,57900 Da
isoelectric point:5,02050
aromaticity:0,08299
hydropathy:0,03596

Domains

Domains [InterPro]
DC_0018
ATT
1–255
DC_0018 DC_1863
G3DSA:2.10.10.80
ATT
64–137
G3DSA:2.10.10.80 IPR011050
XYC70114.1
1 723
Architecture
ATT
STR
RBD
ATT 1-255 | STR 256-518 | RBD 519-719 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYC70114.1
1 723
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,9917
Central domain 180 668 490 0,9841
C-terminal 669 723 54 0,9662
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-668
C-terminal
669-723

Taxonomy

  Name Taxonomy ID Lineage
Phage Azotobacter phage TayeBlu
[NCBI] 		3418520 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Azotobacter vinelandii
[NCBI] 		354 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYC70114.1 [NCBI]
Genbank nucleotide accession
PV565308.1 [NCBI]
CDS location
range 36368 -> 38539
strand -
CDS
ATGGCAGATTCATGCGCCCAGTATGTCAGCACCGATGACCTGAAAGCGGCAAAAGAGTCGATTCTGCATATCGAACACGTAGCGACCAGTAAAGACGCTAACGGAAACCCTGCGCTGGTCGTCACAGATCCTATTCGCGGTAATGATGTAACGAATACTACCCTAGATGGTTTGTTTTCTGATATCGGTTTTAAACCGGTAAACGGTTCATTCGAAGATGGCGGCACCCTGGTAAATCGCTGGGATGTATTGCTGTACGAAACAAACGGATCGTTTTACCAGTGGACCGGTGCAATCCCTGTTGGCGGATTAGTTGTATCTGCCGGTAGTTCTCCGTTTGATAGCGGTGGTAATTTATTGCCGGGGTGGATGGATCAGACAGATTTGACACTTCGTACAGATCTTGCTGCAACAACGGGTGCGGGGTTGGTGGGGTTTAACTCAGCAAGTTCCTACCCGACAGGAACTATAGGCGACTTTGTCGATTCCGCGGTGAATTATTCAACACCCCAAATGTACGGGGTTGAGCCTAATTCATCCGTCAGCTTCGGCACTGCGCTTGACGCTATGTTTGCTGCTGGCGGAGACATCAGATTTGAAAAGCCGGGCACGTATATCACGGACCATTCCCTTATTCTCGTTTCTGGCACCCGTCTTTGGATTGGCCCCGGCGTAACAATCAAGCTCGCTAACGCTTCAAACGTACCTGTATTTAAGAACTACGCCTACGCCAATTCGGCAGCGGTGGACGCGTATATCGAAATATGGGGTCCTGGCACAATAGATTACAATGGTGCAAACCAGACTGTTGTTGGCCTTGGCTCAATGGCGTCAATTCTTAAAGGTATTATAAGCCTGAAAATTGGCGGCGGTATTAAGGTTATCAACGCCAATAAATACGCATGGCTTGTATGCAACATCACCTATTTCACGGCAGACGGGCTAAATTTCGATACCATTAGTGACGGTTTGCACTGTCAGCCTCCAATCCGCCATTCATATATTCGCAATCTCAAAGGTAAGACAGGCGATGATATGTTGGCCTTCACTATTGGAGACTATGCCAACTATAACATCAGCGAGCCTGGTGACTTCTCTAACGTAGATGTGGCGGGCTTATTCTGTGAGAGCGCTCTTTGCGCGGTTAAGATTACAGGTGATGGCACAGGCAATTTTGTCCGCTTCCGCGTTTCTGGGATTTACGGTGATACCCTGCATGCCGTTTTTCGCGTATGGGGCGACACCAACCTGACTAAAACAACGGTTAAAAATCTGACGATAGAGGACGTGCATGCCATTCCCGGTTCGGCTTGCGACACTATAGAGATTGATGACAGAGGGTTCGGCACGTCTGGATATAGTATTGAAATTGATGAAATACACATTAAGAACGTGTACACGGTAAACAATACACAACAAACCGTAAAATTCGCCGGCACGTTTGGTTCTGTTATCCACTCCCTCGTCTTAGAAAACCTGCCAAGAAATGCATTAACAATTCTGGGGGTTAATAACGCCGGGACGGTGGCGATTGATAATGTAACTATTAAAAACGGTAATGTCATATTCCCGGACAATGCTAACGCGGCAGTTGTTGTGAATCGCGGTACAATCGGAAATATGAATATTGAAGATGTTTCATGTAATTTTGTGAGCACAAGTAATGGTCAGGTGGCGCGTTTAATTGCAGGTTGCACCGTGACACGCGCAAACTGGGTTAATGTGTATCAGCTACGCGGTCAGCGTGGGTGGAACCACATCACATCAGCTATGACTGGCGGCACGGAGCTTAACTTGACAAATTATACTTGTGATGGCGAAGGCCGTATCGCGCAGGTTACCGGGTCAACGCTAACGGTGCGAATGTCTAACTGCCGTCGTATTAATGATACGGGCTCTCAGACTGCATTCTTTGCGAGCGGTGGGACAATCACATTGTCTGGTAGTCTGGAAACTGGGTTTAACGTTGTCGGCACAAACTCTGGTGGGGTAATTAAAACAACGCCAGGCGTTCACAATATCTCATGTAACGTTGACCTCCTAACGTCAGTGGATGGGTCTAGCGTGCAGAACCTAAACGGCTCCCTGGCTTGTGGTGTAGGTCGTGTTCTTGTGCAGACAAAGGTATGGAAAAACCTCTTCTCCGGTGCAACCTACACCAGCAGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4360b80641a34ba715e3d33a1196b4eaab64419641344ad04bb0632b9589f86f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of TayeBlu, a novel bacteriophage of Azotobacter vinelandii Akanbi,T.M., Labat,M., Sun,T., Smith,D.A. and Bagby,S.C. — — GenBank