Protein

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Genbank accession
WAX23000.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVIDNRPGDVLYTNVPPIDENSNLDLTSPNNVLYKYNSIEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTTFPSKNINNEDQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLAPKYSHHRLTCFEFADGLNPLSKLIADGTVPNADYSAVPNIQERTDLEIYYQKVSKAFATIPDTSGDPATDQIQARVEENRIVGPISDEYRVFQITRNGQTATAVTVDELGNERNHGFSVGVNINISGVTGSTGPQSELDASLYNGSFTVTSASGNVFTYQMSDEPTGNATGNSISVKTEIDTVDSASPYAFNLSLRSVWGMNGMLADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWAHRHIVASNDAFIQAVSVFAVGYGSHFTCESGADMSITNSNSNFGNTALRSAGFKAKSFSKDKAGAITHIIPPKALNVISTTATGTSGTNTITLANDGSVNGVIQGMTITGDNIGSGATVSSVNVNTRVITLTVNNSGTVNGNVIFGEETSINWVNIDIQRTKDINAALVGQGGTAGTRLYLFGYTTEASPPSTKVQGYAIGARQDGTGVNAIPDKINCLLVPTVGAASSEVRTAKISPYGPSVSSLSAGAAGSPLQFDSNTYTVNGVGGTIGGWYLSVDSNDNEIYTTLTTNTQYNSVNFTPTTFIKRIPDPRDLQDRTYRVRYVIDKDKTNPLPRDPLSGYVIQPLNSDTTSFKLNRTFYIYDIEVVQEFERGISDGIYYLTLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPDAAISVADNETIGLVNATDGASPTPNKDPKLSITKEATVFLLTDTGWQQPSTTPNYDSVNSRLSGVELTARAGDEETRKISIRETNDGVVSPIPVELRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQVSSTNNIVAKKITYNNQDGTVIKQTLLAPEDANGQPSFANITGYDTPADGDLVYNINWEPGKSLGWIYYNGTWHEFGLTDVGFIDIADKDPLIPANDLTIDSDGTVGSGIGIGRNVLDSYRVAVEGDVYVDGNLVGTGQGFVGSDKYITRTYTGDGTALTFAISTYTGVQHTDDSCLVFLNGVAQIAGTNYTVDANGANIVFSAGDAPLSSDTVHIVEMPI
Physico‐chemical
properties
protein length:1335 AA
molecular weight: 143553,01170 Da
isoelectric point:4,66025
aromaticity:0,09139
hydropathy:-0,25228

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAX23000.1
1 1335
Domain Start End Length (AA) Confidence
N-terminal 1 89 89 0,9638
Central domain 90 311 223 0,9023
C-terminal 312 1335 1023 0,0599
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-89
Central
90-311
C-terminal
312-1335

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-M1
[NCBI] 		2994463 No lineage information
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX23000.1 [NCBI]
Genbank nucleotide accession
OP917831.1 [NCBI]
CDS location
range 152461 -> 156468
strand +
CDS
ATGGCTCTTACTCGTCTTAAGAATATTATTACGTCCAGAACTGGACGTATTATCTACGTCAACCCTGATGATTTTGACGCTTCGGATGCCATTGACAATAGAGGAAACTCTGCTCTCCGTCCATTTAAGTCGATTCAAAGAGCATTTCTTGAAGTTGCTAGATTTTCGTATCGAGTAGGTCTGTCGAACGACGAATTCGACGCCTTCTCGATTATGCTGTATCCAGCAGAATATGTCATTGATAATAGACCTGGAGACGTTCTTTATACGAACGTTCCACCTATTGATGAAAACTCAAACTTAGACCTCACATCTCCCAATAACGTACTGTATAAGTACAATTCGATTGAAGGTGGTGTTATTGTTCCTAGAGGTTGTTCTCTTGTAGGTACTGACCTTCGTCGTACTAAGATTATTCCTAAGTACGTTCCTTATCCTACAACTTTCCCATCCAAAAATATTAACAACGAAGACCAAGTTCCCCCTAGAACTGCAATCTTCAAGGTAACTGGTGGTACTTATTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAAGAAGGTGTGTATTTCAAACCAGATAGTACAGAAACATTAGCACCTAAGTATTCTCACCATAGACTGACTTGTTTTGAGTTTGCTGATGGTTTGAATCCCCTCTCTAAATTGATTGCTGACGGTACTGTTCCTAATGCAGACTATTCTGCAGTTCCTAACATCCAAGAGAGAACAGACTTAGAGATTTACTATCAGAAAGTATCGAAGGCATTTGCTACAATTCCTGATACATCTGGTGACCCCGCCACTGACCAGATTCAGGCAAGAGTTGAAGAAAACCGAATCGTTGGTCCTATTTCTGATGAATATCGTGTTTTCCAGATTACTCGTAACGGACAAACTGCAACGGCAGTTACTGTTGACGAATTAGGTAATGAAAGAAATCACGGATTCTCTGTTGGCGTTAACATCAACATCAGTGGTGTTACTGGTTCTACTGGACCTCAGTCAGAATTAGATGCATCATTGTATAATGGTTCATTTACAGTTACTTCTGCATCAGGTAACGTATTTACCTATCAGATGTCAGATGAACCAACGGGTAATGCTACTGGTAATAGTATTTCTGTTAAGACTGAGATTGATACTGTTGACTCTGCATCTCCATATGCGTTTAACTTGTCCCTGAGAAGTGTCTGGGGCATGAATGGTATGCTTGCTGATGGTAGCAAAGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACTGGTCTATCTCTACAGAAAGATGATAGAGCATTTGTAAGATATAATGCTTCTACTGGTAACTATGACGTTGCAACTGCTGGTGATGGTGCTCACTTAGATGGTTTCGCTGAGTATCGTAAGGGATGGGCACATAGACACATTGTTGCATCTAATGATGCTTTCATTCAAGCAGTTTCGGTGTTCGCTGTTGGATATGGTTCGCACTTTACTTGTGAGAGTGGTGCTGACATGTCGATTACCAACTCCAACTCCAACTTTGGTAATACTGCCCTTCGTTCTGCTGGATTCAAAGCAAAATCCTTCTCAAAAGATAAAGCAGGTGCAATCACTCACATCATTCCACCTAAAGCACTGAACGTTATTTCAACAACTGCTACAGGTACTTCTGGAACCAATACTATTACTCTTGCCAATGATGGTTCTGTAAATGGTGTTATCCAAGGAATGACAATCACTGGTGACAATATTGGTTCTGGTGCTACTGTAAGTTCTGTCAATGTTAATACTCGTGTAATTACACTGACTGTTAATAATAGTGGAACAGTCAATGGTAACGTCATTTTTGGTGAAGAAACCTCTATTAACTGGGTCAACATTGACATTCAACGTACTAAAGATATTAACGCTGCATTAGTTGGACAGGGTGGAACTGCTGGAACTAGACTATATCTCTTTGGATATACTACAGAAGCATCACCTCCATCGACAAAAGTTCAGGGTTATGCAATCGGTGCCCGTCAAGATGGTACAGGCGTTAATGCTATCCCAGATAAGATTAACTGTCTGTTAGTTCCAACAGTAGGTGCTGCATCTTCTGAAGTTCGCACAGCAAAGATTTCTCCTTATGGTCCATCTGTTTCTAGTTTAAGTGCTGGTGCAGCAGGTTCTCCATTGCAATTTGATAGTAATACATATACAGTTAATGGTGTTGGTGGAACTATTGGTGGTTGGTATCTGAGTGTAGATTCCAATGATAACGAAATTTACACAACACTCACTACCAATACTCAATATAATAGTGTAAACTTCACTCCTACAACTTTCATCAAGAGAATTCCTGACCCTCGTGACTTGCAAGATAGAACATATCGTGTTCGTTATGTAATCGATAAGGATAAGACTAATCCTCTGCCTAGAGATCCTCTGTCGGGTTATGTAATTCAACCCCTGAACAGTGATACTACGTCATTTAAATTAAATAGGACTTTTTATATCTACGACATTGAAGTAGTACAAGAGTTTGAGAGAGGCATTTCCGATGGCATCTACTACCTTACCCTCCTTTGTGCATCTATTGCACCTTCGACTTCTAATTTCAATGACAGAAAGTTCAGTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTGATGCTGCGATATCCGTCGCTGACAACGAAACTATCGGTCTCGTAAATGCAACCGATGGTGCATCTCCTACACCTAACAAAGACCCCAAACTTTCTATCACTAAAGAAGCAACTGTATTCCTCCTGACTGATACTGGTTGGCAGCAACCAAGTACAACTCCAAACTATGATTCTGTTAATAGCAGACTCTCTGGCGTTGAACTTACTGCTCGTGCTGGTGATGAAGAAACTAGAAAGATTAGTATTCGTGAAACTAATGATGGTGTAGTTTCTCCCATCCCAGTAGAACTTAGAAGACACTCTATCTTACGTTCTGGTAACCATACGTTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCAACAGCGTTCCCTCAGACACAAGTAGAGACCTTATCTGCTGACCAAGTTAAGTTCTCTCAGTCGATTAAAGAGGAAGCAGGTGTTGCCTTCTATTCGGGTCTTAACTCTAACGGTGACCTGTTTATCGGTAACCAGGTTATCAACCCTGTTACAGGTCAAATTACAAACGAGGATATTGCACAACTGAATGTTGTCGGTGAAGAGAATACAACGATTGAGACATTCTCTGAGTTGGTTCTTACTGACAAACTTACAGTTATCGGTGGTGCATCTAACCAGTTAGAATCTATCTTCGCTGGTCCTGTTACCTTCCAAGGTCAAGTATCTTCCACCAATAACATTGTTGCTAAGAAAATTACCTATAACAACCAAGATGGTACAGTAATTAAGCAAACTCTGCTTGCACCAGAAGATGCAAATGGTCAACCTTCTTTTGCCAATATCACAGGATATGATACACCTGCCGATGGTGATTTAGTTTACAATATCAACTGGGAACCTGGTAAGTCTCTTGGTTGGATTTATTACAATGGAACCTGGCATGAGTTTGGTCTGACTGATGTTGGATTTATTGATATTGCTGATAAAGATCCTCTCATTCCCGCTAACGATTTAACCATCGATTCTGATGGTACTGTAGGAAGTGGTATTGGTATTGGTAGAAATGTTTTAGACTCTTATAGAGTTGCTGTAGAAGGTGATGTCTATGTTGACGGTAACCTTGTTGGTACTGGTCAAGGTTTCGTTGGTTCTGATAAATACATCACCAGAACATATACTGGTGATGGTACAGCCCTAACATTTGCAATTAGCACCTATACTGGTGTTCAACACACCGATGATTCTTGTTTAGTATTCCTCAATGGTGTTGCACAGATTGCAGGCACTAACTATACAGTAGATGCCAATGGTGCAAACATTGTCTTTAGTGCTGGTGATGCTCCACTAAGTAGTGATACCGTTCATATTGTGGAGATGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd05262bb3281e24e77e7e04c108bd118ad1587e39589ebe91af53d9de7def69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50