Protein

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Genbank accession
WBC28651.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDAAMNDRVNTTWNDRFGVLRPTMKGYEEQFNDWLDAQGFEPGFLEYVDGSPLTVDRPTQLIQRGDNIYSVKRPASFPVTLSGNWAADEPLLVAQVDRTLQATLATSAGAGMIGYRERTVADRLNDTANVKDYGAIADGAYHPLSERFATLADAQVVYPHATALTDSIDWAAYQAAINSGSPHVHAPGGHYVMNRGTLAERDIRYTGDGYATHVDFSLADGPGSCMLTQGELTQIGDLSVSVVKGARTLTFAAAPDLVSGDVVVVYNPTNGSWLADRDPYRAGEMWKVHSVSGNTVTIYGNSSSVYLFTEVDVYRLRGVRVSVDQMHFSPSDTYSIAPFKVVFGDGVRVSNYYASDVSLYTGLEVERCFDVSINASSTPNMSPAVNDEYGMTISNCHNFSVYGGYAAATRHAVALGGMDDVCCVPNRNGLIYGMHIEGIDIASDIGAGDMHGNADKITYDNCEFRNGVILQGRDATVRNSTIYGVSSTSGEALYGTEVYGGTYTIENNRFISYGNGASFGIIHISPGTSQREALLIIARNNTFELPNATGSTKVLFLRGRNSPLPCSVNIDGMHVHMAPVAMQCFLFADDQVAATLNSNYLIVDGVYGPSGTYLLYPTAKNAGIATRQMRQAGAVNVTTTASATVAAPAQTIRYPYSKMPNVSVQVSSQSGADQSAIGSITPVPIAYNVQPGSIRPAIMAPSGSFAAGGSARLHWSASLDDI
Physico‐chemical
properties
protein length:746 AA
molecular weight: 79947,09120 Da
isoelectric point:5,02186
aromaticity:0,09249
hydropathy:-0,15402

Domains

Domains [InterPro]
DC_1559
ATT
1–174
DC_1559 IPR011050 IPR049350
IPR012334
STR
113–713
IPR012334
IPR049350
STR
252–339
IPR049350 IPR054136 DC_1729
WBC28651.1
1 746
Architecture
ATT
STR
ATT 1-174 | STR 175-746
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBC28651.1
1 746
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9950
Central domain 192 635 445 0,9946
C-terminal 636 746 110 0,9523
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-635
C-terminal
636-746

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Fyn8
[NCBI] 		3003696 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBC28651.1 [NCBI]
Genbank nucleotide accession
OP966821 [NCBI]
CDS location
range 18133 -> 20373
strand +
CDS
ATGACGACCTACGCCACCGGCAATCCGCTTGGCTCCAAAGACCCGCGCGACTTGTACGACAACGCCGAGAACTTCGACGCGGCGATGAACGACCGGGTGAATACCACGTGGAATGATCGTTTCGGCGTTCTTCGCCCAACGATGAAGGGGTATGAAGAGCAGTTCAATGACTGGCTGGATGCTCAAGGATTCGAGCCAGGCTTCCTTGAATATGTCGACGGCTCGCCGCTGACCGTAGATCGTCCGACCCAACTGATCCAGCGCGGGGACAACATCTACAGCGTCAAGCGTCCTGCATCGTTCCCCGTGACCCTTTCCGGCAACTGGGCAGCCGACGAACCCCTGCTGGTGGCCCAGGTTGACCGGACGCTGCAAGCCACCCTGGCCACCAGCGCTGGCGCCGGGATGATCGGCTATCGCGAGCGCACCGTAGCCGACCGCCTGAACGATACTGCGAACGTAAAGGACTACGGAGCAATCGCAGATGGCGCTTATCACCCGCTGTCAGAGCGGTTCGCAACACTCGCGGATGCGCAAGTGGTTTACCCACACGCCACTGCGCTGACCGACAGCATCGACTGGGCGGCGTATCAGGCGGCAATCAACTCCGGATCTCCGCATGTGCATGCGCCAGGCGGCCACTACGTCATGAATCGCGGAACTCTCGCTGAGCGGGATATTCGGTATACCGGTGATGGCTATGCCACACACGTGGATTTCAGCCTGGCAGATGGACCCGGTAGCTGCATGCTGACGCAGGGCGAGCTTACGCAAATCGGCGACCTGTCGGTAAGCGTAGTGAAAGGGGCGCGCACATTAACCTTTGCTGCCGCCCCGGACCTTGTATCAGGTGATGTGGTCGTTGTGTACAACCCAACTAATGGATCGTGGCTGGCTGACCGCGATCCGTATCGCGCTGGTGAGATGTGGAAGGTCCATTCGGTTAGCGGCAACACCGTTACGATCTACGGCAACAGTTCGTCGGTGTACCTGTTCACCGAGGTTGACGTATACCGCCTGCGCGGCGTGCGTGTCTCTGTTGACCAGATGCATTTCTCGCCGTCTGACACATATTCCATTGCGCCGTTCAAGGTTGTTTTCGGCGATGGCGTTAGAGTTTCGAACTACTACGCCAGCGATGTCTCGCTTTACACGGGGCTAGAGGTAGAGCGTTGTTTTGACGTGTCGATCAATGCCTCCTCAACTCCAAACATGTCTCCGGCCGTCAACGATGAATATGGCATGACTATCTCGAACTGCCATAACTTCTCAGTTTACGGTGGTTACGCGGCAGCAACCAGGCATGCCGTGGCGCTGGGCGGAATGGATGACGTATGCTGTGTGCCCAATCGTAACGGCCTGATATACGGCATGCACATTGAAGGTATTGATATCGCGTCGGATATTGGTGCAGGTGATATGCACGGCAATGCCGACAAAATCACGTACGACAACTGTGAGTTTCGGAACGGTGTAATTCTTCAAGGGCGCGATGCCACCGTCCGTAACAGTACGATCTACGGAGTATCAAGTACCTCCGGAGAAGCGCTCTACGGAACCGAAGTTTATGGCGGAACGTACACAATCGAGAACAATCGTTTTATCAGTTATGGAAATGGAGCTTCTTTCGGCATCATCCATATTTCACCGGGGACAAGCCAACGCGAAGCGCTGCTCATCATCGCGAGAAACAATACGTTCGAATTGCCGAACGCGACAGGATCGACCAAGGTGTTGTTCCTGCGTGGACGCAATAGTCCTCTCCCTTGCAGCGTGAACATCGATGGCATGCATGTCCACATGGCGCCTGTTGCGATGCAGTGCTTCCTTTTCGCAGATGACCAAGTTGCGGCCACTCTGAACAGTAACTATCTCATCGTGGATGGAGTATACGGGCCAAGCGGCACCTATTTGCTGTACCCAACCGCAAAGAACGCAGGTATAGCAACCCGACAGATGCGCCAAGCTGGCGCAGTGAACGTGACCACCACGGCATCCGCTACGGTCGCAGCTCCAGCTCAGACCATTCGCTACCCGTATTCCAAAATGCCCAATGTTAGCGTTCAGGTTTCAAGCCAGTCGGGCGCTGATCAGAGCGCTATCGGATCGATCACGCCTGTGCCGATTGCGTACAATGTTCAGCCCGGCAGCATTCGTCCAGCCATCATGGCCCCTAGTGGATCATTTGCCGCCGGCGGGTCTGCGCGTCTTCACTGGTCTGCGAGCCTAGATGATATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
00d3c71fd0591d6bd829a079ccfad3bf5d84221ff04a2223d7a19c78c86f9362
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8311
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the lysogenic Pseudomonas bacteriophage Fyn8 Ostergaard,M.Z., Damgaard,A.S., Rosenbaek,E., Krogh,T.J. and Kirkpatrick,C.L. 2023 36779715 GenBank