Protein

View in Explore
Genbank accession
XYL45635.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSSNTQTIIPIADPDRGWREWYRPEIYTGPGGTGRMVPNVDDKVWDWEQGASRVVEVDYSTGLSVLKPWTAPVEVPVDEKDFLLGSGPGYTSESFRALLDTSVLPHSLQLDGRLFCYRSTASYAKVFLGTDITSNGKVISKYYDASGNLLGENLPLEIVAIEKLNNLAIKSVKAGYCTQKLDDGEVVTVVFYDDVGGVCSYSKLRVENTSFIRAVETGERYITSVEVLSPFRSQSDPNLIEYPVNVDLGSVAMMARVNYTDGQRTVPIDGIKCSMLGLGNYVSTVLGQEVPLVLSYALGSDESCYDAINPNNKYITTSYKARTVAVDGAYSVKLFAFPCWDEDNLEYTLHWFLYNLNRETWYRVDHLIEASSNGAAYNPKKIGATQQFVVAIDLSRVDSRFAKYRHIQNMELTLLCTGDRKQTLWTVTHEPLHPFPYGVEVFASFKHLSGGNYRCNLAKEYTDRALWLERFFYDTFPVSNPDLELRPAAPTHFIVEANGNETEYPLAAWNQDFVVPTEIRHGQNIYLHWIRRDGVTDQHLGVSGVSVRYEDDAADLPK
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62690,71950 Da
isoelectric point:5,04733
aromaticity:0,11470
hydropathy:-0,27204

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL45635.1
1 558
Domain Start End Length (AA) Confidence
N-terminal 1 63 63 0,2974
Central domain 64 307 245 0,4721
C-terminal 308 558 250 0,7880
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-63
Central
64-307
C-terminal
308-558

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AerVM_332-Vera
[NCBI] 		3414679 Viruses >
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL45635.1 [NCBI]
Genbank nucleotide accession
PQ474292 [NCBI]
CDS location
range 256809 -> 258485
strand -
CDS
ATGAGTTCAAATACGCAAACAATCATCCCTATCGCGGATCCAGATCGCGGTTGGCGTGAATGGTATCGTCCCGAGATCTACACTGGTCCGGGCGGTACAGGGAGAATGGTCCCTAACGTCGACGATAAAGTCTGGGATTGGGAGCAAGGGGCCTCTCGGGTAGTTGAGGTCGACTACAGTACTGGCCTCTCTGTCCTGAAGCCTTGGACAGCGCCGGTAGAAGTCCCTGTGGACGAGAAAGATTTCCTGCTGGGCTCTGGACCGGGGTATACCTCCGAATCGTTCCGTGCTCTGCTCGATACTTCCGTACTGCCGCACTCCCTGCAACTGGACGGTCGGTTGTTCTGCTATCGTTCAACCGCAAGTTACGCCAAGGTATTCCTCGGTACCGACATCACTTCCAACGGGAAGGTGATCTCCAAGTACTACGATGCCTCCGGTAACCTGCTGGGCGAAAACCTGCCGCTCGAGATCGTGGCAATCGAGAAGCTCAATAACCTGGCAATCAAGTCGGTTAAAGCTGGGTACTGTACCCAGAAGCTTGACGACGGCGAAGTCGTGACCGTAGTCTTCTACGACGACGTCGGTGGTGTGTGCAGCTACTCTAAGCTGCGCGTCGAGAACACTTCCTTCATCCGCGCCGTGGAAACTGGCGAGCGGTACATCACGTCAGTTGAAGTGCTGTCTCCGTTCCGGTCTCAGTCCGATCCGAACCTGATCGAGTACCCGGTTAACGTTGACCTTGGTTCTGTAGCAATGATGGCCCGTGTCAACTACACCGACGGGCAGCGTACCGTACCTATCGATGGTATCAAGTGCTCTATGCTGGGGCTGGGTAACTACGTCAGTACCGTATTGGGTCAGGAGGTGCCGTTGGTACTCTCTTACGCTCTGGGTTCCGACGAAAGTTGCTACGATGCAATCAACCCGAACAACAAGTATATCACGACTTCCTACAAGGCCCGTACCGTGGCTGTAGACGGGGCGTACAGCGTCAAGCTGTTTGCATTCCCATGTTGGGATGAGGATAACCTGGAATACACTCTCCACTGGTTCCTCTATAACCTCAACCGTGAGACTTGGTATCGTGTCGATCATCTCATTGAGGCCTCCAGTAATGGTGCGGCCTACAATCCGAAGAAGATCGGTGCGACACAACAGTTCGTGGTTGCAATCGACTTGTCTCGTGTAGACAGTCGCTTTGCTAAGTACCGTCATATCCAGAACATGGAGCTGACGCTGCTGTGTACTGGCGATCGTAAACAGACCTTGTGGACCGTTACGCACGAGCCGTTGCATCCGTTCCCATATGGCGTCGAAGTGTTTGCTTCGTTCAAGCATTTGTCTGGTGGTAACTATCGTTGCAACCTGGCAAAAGAGTACACCGACCGTGCGCTCTGGCTGGAACGTTTCTTCTACGACACCTTCCCTGTCTCCAATCCGGACCTGGAACTTCGTCCCGCTGCGCCGACTCACTTCATCGTTGAAGCGAACGGCAACGAGACTGAGTACCCGTTGGCTGCTTGGAACCAGGACTTTGTCGTACCGACAGAGATCCGGCATGGTCAGAACATCTACCTGCACTGGATCCGTCGTGATGGCGTGACTGACCAGCACCTCGGTGTGTCTGGTGTTTCCGTCCGTTACGAAGACGATGCAGCAGATTTGCCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
662cf27d7d420d6d4bc38115f89ec2f43aed69c48d98c8da348e66c938eef29e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Giant Phages vB_AerVM_332-Vera and vB_AerVM_332-Igor and Siphophage vB_AerVS_332-Yulya Infecting the Same Aeromonas veronii Strain Babkin,I.V., Morozova,V.V., Kozlova,Y.N., Fedorets,V.A., Tikunov,A.Y., Ushakova,T.A., Bardasheva,A.V., Zhirakovskaya,E.V. and Tikunova,N.V. 2025 — GenBank