Protein

Genbank accession
ADP00258.1 [GenBank]
Protein name
predicted protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,65
TSP
Evidence RBPdetect2
Probability 0,82
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTQITEKGIKDGEIINADINASAAIAGTKISPNFGSQNIQTTGGISNAQYVNLSSTSPSIDFVDTNNNSDFMLQNANGVFKLYDSTNNADRVGVDSSGNVGIGTSSPAANLHVHTDSNGEGVLIKSTGNTSNALTFDANRGAEGVIAAMYGRWNGTTVAQMSFVSGSDTTDKNDGFITFGTESAASNGNVNATERMRIASDGKVGINIAGTDNTSPVRNLDIADSSGAILRLISSDDTLGANERLGEIEFFSDDDDNAHIGAFIKAIADPSDSAGRRTALTFGTQNHDASINAVEKLRIDANGNVGIGTTSPNSLLNIHGVFETNAFDSASGSGGRTSTGLLIGDAYSAGKTSSDDRNSIIWNERGLDIDFATSDAVRMKLVHDGRLRLLCQDFSSDPSSSNSGVMLGSTSTGSVFSSGSATNTQTHIIFRNGNGDVGTIQTSGSSTAYNTSSDYRLKENAVAISDGITRLKTLKPYRFNFKADADTTVDGFFAHEVTAVPEAISGTKDETKDILYTEEDTIPSGKKVGDVKQVDPVYQGIDQSKIVPLLTAALQEAVAKIETLETKVAALEAA
Physico‐chemical
properties
protein length:576 AA
molecular weight: 60224,13100 Da
isoelectric point:4,62018
aromaticity:0,05729
hydropathy:-0,29826

Domains

Domains [InterPro]
IPR030392
455–570
IPR030392
Coil
556–576
Coil
ADP00258.1
1 576
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-SSP2
[NCBI] 		444876 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8017
[NCBI] 		166321 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP00258.1 [NCBI]
Genbank nucleotide accession
GU071107 [NCBI]
CDS location
range 43945 -> 45675
strand +
CDS
ATGGCTTTAACACAAATAACAGAAAAAGGTATTAAAGATGGTGAAATTATTAATGCCGATATAAACGCTAGTGCAGCGATAGCTGGAACAAAGATTTCACCTAATTTTGGATCGCAAAATATTCAAACAACTGGTGGTATATCAAATGCACAGTATGTAAATTTAAGTTCAACTTCCCCTTCAATAGATTTTGTTGATACTAATAATAATTCCGATTTCATGCTCCAGAATGCAAATGGAGTTTTTAAACTTTATGATTCAACAAATAATGCAGATAGAGTTGGTGTAGATTCTTCTGGAAACGTAGGTATAGGCACATCAAGTCCAGCAGCAAATCTTCATGTTCATACTGACTCAAATGGAGAGGGTGTATTAATAAAATCTACAGGAAATACCAGTAATGCTCTTACTTTCGATGCAAACAGGGGTGCTGAAGGTGTAATAGCAGCAATGTATGGCAGATGGAATGGAACAACAGTTGCTCAGATGAGTTTTGTTTCTGGTTCTGATACAACTGACAAAAATGATGGATTTATTACCTTTGGAACGGAAAGTGCAGCATCTAATGGAAATGTAAATGCTACAGAGCGTATGCGTATAGCATCTGATGGAAAGGTTGGAATTAATATAGCTGGCACTGATAATACATCACCTGTTCGTAATTTAGATATTGCTGATAGCTCTGGAGCGATACTACGTTTGATAAGTTCAGATGATACTTTAGGTGCAAATGAAAGACTTGGAGAGATAGAATTTTTCTCAGATGATGATGATAATGCACATATTGGTGCTTTCATAAAAGCGATTGCTGATCCGTCAGATTCCGCAGGAAGGAGAACTGCATTAACTTTTGGAACACAAAACCATGATGCAAGTATAAATGCTGTAGAAAAATTAAGGATTGATGCTAATGGAAACGTAGGTATAGGTACAACAAGTCCTAATAGTTTGTTAAATATTCATGGGGTATTTGAAACTAACGCTTTTGATAGCGCCAGTGGAAGTGGAGGTCGTACTTCTACAGGTTTATTAATTGGTGATGCTTACTCAGCAGGTAAAACCTCAAGTGATGATCGAAACTCGATTATATGGAATGAGCGTGGTTTAGATATAGATTTTGCTACTTCTGATGCTGTACGAATGAAGCTAGTTCATGATGGAAGATTACGCTTACTGTGTCAGGATTTCAGTTCTGATCCTAGCTCAAGTAACAGTGGAGTGATGTTAGGTAGTACTAGTACTGGTTCTGTATTCTCATCTGGAAGTGCTACTAATACACAAACACATATAATTTTTAGAAATGGTAATGGAGATGTCGGTACAATACAAACAAGTGGGTCTAGTACTGCTTATAACACTTCCTCTGATTATCGTCTTAAAGAAAATGCTGTTGCAATATCTGATGGTATAACAAGGTTAAAAACACTAAAACCATATAGATTTAATTTTAAAGCTGATGCAGACACAACAGTTGATGGTTTCTTTGCACACGAAGTTACAGCAGTACCAGAAGCTATATCAGGAACAAAAGACGAAACAAAAGATATTTTATATACAGAAGAAGATACAATTCCATCTGGCAAGAAAGTCGGAGATGTTAAACAAGTTGACCCTGTTTATCAAGGAATTGACCAAAGTAAAATTGTACCTTTACTAACTGCTGCTTTACAGGAGGCAGTGGCAAAAATAGAAACATTAGAAACTAAAGTCGCAGCATTAGAAGCTGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5a21c77f7cdb27f6231d685de4a93f23c21e8f92f59cd5bf30aaea7ad0ddbc62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7271
Evidence 0,7271
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank