Protein

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Genbank accession
QGH75030.1 [GenBank]
Protein name
putative tail-fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MALRRDVTYSGRFTPATTERPQGGFKNRTSPTSEDGSYLEEQWLNDIDGFFASALMDAGVVPNGNVDEGGNSQLYDAVLRTREVTPLNDSWNGFFTRAHITQLPSPAGVPATSGSGGTAYSADDEWSIGNFASGGTISLDDDGLIFSQGIYKLFTFTAEQLSIIDVTKVPVYIVGQDGSRHFVKHNGTGVVVTKPDTTTLKVQVNNAILAELGITKVFSFFVTATVGFVQEKCDLALPPSLGFFEIEGLPQENGFIITNMVIGGNRVIIQNVTFGPITDGGSANVPWITPFPNAVFNCVASPLGLGSNAASSSMATGNPTVNGVNVYNWGTIQAKVRIFAIGY
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36515,44870 Da
isoelectric point:4,69140
aromaticity:0,10204
hydropathy:0,00117

Domains

Domains [InterPro]
DC_0226
STR
1–342
DC_0226
G3DSA:2.60.40.3940
RBD
250–343
G3DSA:2.60.40.3940
QGH75030.1
1 343
Architecture
STR
STR 1-343
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH75030.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,9726
Central domain 119 317 200 0,1474
C-terminal 318 343 25 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-317
C-terminal
318-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Rostov M3
[NCBI] 		2660724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH75030.1 [NCBI]
Genbank nucleotide accession
MN379461 [NCBI]
CDS location
range 405 -> 1436
strand -
CDS
ATGGCTTTAAGACGCGACGTTACATACTCGGGGCGGTTCACGCCGGCAACTACAGAGCGCCCTCAAGGTGGGTTTAAAAATCGCACGTCACCTACTTCGGAGGATGGATCATATCTTGAGGAGCAATGGCTCAACGATATTGATGGATTCTTCGCTTCAGCATTGATGGACGCTGGGGTTGTCCCTAACGGTAATGTTGATGAAGGCGGTAATTCTCAATTGTATGATGCAGTTCTGAGAACCCGAGAAGTTACTCCGCTAAACGATAGTTGGAATGGTTTCTTCACGCGAGCTCACATCACACAACTACCATCACCTGCAGGAGTGCCAGCTACTAGCGGATCTGGCGGTACGGCATACAGCGCAGATGATGAATGGTCGATCGGTAACTTCGCAAGCGGGGGTACTATTTCGCTTGATGACGACGGTCTTATATTTTCTCAAGGTATCTACAAGCTATTTACGTTCACTGCTGAGCAGTTGTCGATTATCGATGTTACCAAAGTTCCGGTCTATATCGTTGGTCAAGATGGTTCGCGGCACTTTGTTAAACACAACGGAACGGGTGTGGTTGTCACAAAGCCAGATACCACAACTCTAAAAGTGCAGGTTAACAATGCAATTCTTGCCGAGCTTGGTATTACGAAAGTGTTTAGTTTTTTTGTAACTGCTACGGTTGGTTTCGTTCAAGAAAAATGTGATCTTGCTCTACCGCCTTCGCTTGGATTTTTTGAGATCGAGGGTCTTCCTCAAGAAAACGGCTTTATCATCACAAATATGGTTATTGGGGGGAATAGGGTAATCATACAAAACGTAACCTTCGGCCCAATTACCGATGGGGGCAGTGCAAATGTACCATGGATTACCCCGTTCCCTAATGCGGTTTTCAACTGCGTAGCTTCACCACTGGGTCTGGGATCAAACGCGGCCTCTTCGTCGATGGCCACAGGTAACCCTACTGTTAATGGAGTTAACGTATACAACTGGGGTACAATACAAGCTAAAGTAAGAATATTTGCGATAGGTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1fdafce824b512c7397f6e2ae0f6f081ee64eac81927158aa4005fee036d697f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50