Protein

View in Explore
Genbank accession
WDR21813.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MQNNTLKHISDESKYVTFDPTNSGFNENITNVQDALSAISVDGISGVPQATETVAGKARIATQLEVDAGVSADTFITPATLSYRMQRPEASTTVLGVTQYATDEEAIAGTATNRTIVASSLKATIDNVFTVRTSTETSNGVLKISSTPAAQAGVDDTTAMTPLKTKQAIAAATALIPAWGPATESEQGVVRLATLSQLRDPNIRDGYSVSPFTLNQWQSTESNLGAIKLATSGHMDGGSDHTTAVTPYRFASTRATTGRAGTTILSNDLNGDGSKALSANSAVLPSNRAAVSAGVYEHDTAADNKYMTRNNLKAYLPVGTMTLAAYNYDTGNCLKCNGRWLNKHQWPELFAVIGFTYGGDWGDNFAIPDMRGLVPRGFDDGRGLDPGRGFGSYQEDTMQQITAGWTMDDQAVTSNYPPSGACEARDYGSVNYDASSDDRKWRGFRMYFDSARQTRVSHETRQKNLALNYVIVAR
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50882,64330 Da
isoelectric point:5,37358
aromaticity:0,07806
hydropathy:-0,40759

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR037053
ATT
305–371
IPR037053
SSF88874
STR
309–471
SSF88874
IPR011083
ATT
319–375
IPR011083
WDR21813.1
1 474
Architecture
STR
ATT
STR
STR 1-304 | ATT 305-375 | STR 376-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenM_UTK0003
[NCBI] 		3028906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR21813.1 [NCBI]
Genbank nucleotide accession
OQ359887.1 [NCBI]
CDS location
range 79770 -> 81194
strand +
CDS
ATGCAAAACAACACTCTAAAACACATATCAGATGAATCCAAATATGTAACATTTGACCCAACTAATAGTGGTTTTAATGAAAATATAACTAATGTGCAGGATGCTTTATCTGCTATTAGCGTTGATGGTATTTCAGGAGTTCCACAAGCTACAGAAACCGTCGCAGGTAAAGCTAGAATTGCAACTCAATTGGAAGTCGATGCTGGTGTTTCTGCGGATACATTTATAACACCAGCAACGTTATCATATAGGATGCAACGTCCAGAAGCGAGTACAACTGTACTTGGTGTAACTCAATATGCAACTGATGAAGAGGCTATAGCTGGAACTGCTACAAACCGCACTATTGTTGCGTCATCGTTGAAGGCTACTATAGACAATGTTTTTACAGTTAGAACATCAACTGAAACTTCCAATGGTGTTTTAAAAATATCATCTACGCCAGCTGCTCAAGCTGGCGTAGATGACACCACAGCAATGACACCATTAAAAACCAAACAAGCTATAGCTGCAGCAACTGCTCTTATTCCAGCTTGGGGACCTGCTACTGAATCAGAGCAAGGTGTAGTTCGTTTGGCAACATTGTCTCAATTAAGAGACCCTAATATAAGAGACGGTTATTCAGTGTCTCCATTTACGTTGAATCAGTGGCAATCTACTGAGTCAAATTTAGGTGCTATTAAGCTTGCAACATCAGGTCATATGGATGGAGGTTCTGACCATACAACTGCTGTAACTCCATATCGTTTTGCTTCCACTAGAGCGACAACGGGAAGAGCAGGGACAACTATTTTGTCCAATGATTTGAATGGAGATGGTTCTAAAGCATTATCAGCTAACTCAGCAGTTCTTCCAAGTAATAGGGCAGCGGTATCAGCTGGAGTATATGAACATGATACTGCCGCTGATAACAAGTACATGACACGAAATAATCTTAAAGCTTATTTACCTGTTGGTACTATGACACTTGCTGCTTATAATTACGACACCGGTAATTGCTTGAAATGTAATGGTCGTTGGTTAAATAAGCATCAATGGCCTGAATTATTTGCTGTCATTGGATTTACTTATGGCGGAGATTGGGGAGATAACTTTGCTATTCCTGATATGCGCGGCTTAGTTCCACGCGGATTTGATGATGGGCGTGGTCTTGACCCAGGGCGAGGTTTTGGCAGTTATCAAGAAGATACGATGCAGCAAATAACTGCTGGATGGACAATGGATGACCAAGCAGTAACTTCAAACTATCCTCCTTCGGGAGCATGTGAAGCTAGAGATTATGGCTCTGTCAACTATGACGCAAGTTCTGATGATAGAAAATGGCGCGGATTTAGAATGTATTTCGACTCAGCTAGACAAACTCGAGTTTCTCATGAAACTCGCCAGAAGAACCTTGCACTTAACTATGTAATTGTAGCTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a3a913c818037b72dd44ba08f89f28574dd0855d2c032add16cede7fa4e4cc1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Hudson,L.K., Wang,J., Bryan,D.W. and Denes,T.G. — — GenBank