Protein

View in Explore
Genbank accession
QIW86450.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MATLLLIENAFRPDANPRQEPVRAGERISSMLRRIGYLKGRGAKAVRKVPFIVVRNGEPVLIAQMSTRIKAKDHISVIHLPKGGGGGSNPLQMVLTVAIAVAAAYTGGLAATAFGSQLAGAAVSAAVMIGGTLLLNMFFPPQMPSAMSLNREKASPTYSISSQGNQARLMEAIPVLYGRFRTFPDLASAPYTESRGNETYLYQLFCITQGQMDIETIQVENDNVSTYGEIEYQIVNPGQSVTLFPDNVISSQAVNNFELTPPEQPGNIKGPFAVSNPGVQVNYIGIDLYLPGGAYYMNDKGRFETSRVNVQFEYQAINDAGVPSGNWMPLFSKEYAFATNTPQSISEKIEVPLGRYQVRGYRTTAGPADNREINVIQWAVMRGYAPSVRQYGDVTLLAMIIKATNNINQQTSRRINVIGTRKLPVWDPVNGWSVNPVATTNPAWAAADILRNTTYGRRLPTSRINIQELYRLSQVYQSRGDEFNGVFDTTSQLWDALTKVLRVGRTVPINYAGLIDFVRNEPKTVPTYMFQPQNMVENSFSTEYAFAEPGSTPNYVQVEYINRETWVSETVDCVLPGVAPTIPAKVQLMGVTSRAQAWREGMSLAAANRDQRRQISFSTGFEGYLPRFGDLVQISHDVPQWGYSGEVLGLNAGPDSEEYGLQGELTTTEELVFVPGLTHQIAFKKRDGSPHGPFNVVPHPSGLYNKAIVQASVAQLQQIYISDGFREELTQYQFGPTERRGLRAIALSATPDSDGKVLLTFTNYAESVHAAENGGVTPPPGPDSNLPGIVTVPVIDSVKLELTPYAWQQLIVATPARGARLYEYEISQDGLNWSNLGTATSPSMQVNLSGGTWFVRVRAIGNLTGPWTTWTGVVEASTLPASRVDHVSITSVVFGIDLEWAVREDDYLAASVEVYWGTTNVLGNATRLIDMPLPGNKFSVTDLGPGAVRYFWFRAIDEAGRVGPWYNNGVGLMGKSSDQADIIMAYLDGKITETQLAQSLIEKIDSGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNDGVLESQVLVLADRFAVGRSDDATGTFKSMFIIDNGNVYIDTAFIKNGTITNLMIGDIIQSNDYVAGVSGWRLHKGAQGFEMNGTGNGYRVRLTNTGLYVWNTNTGVLCVEVGLLT
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 126856,94480 Da
isoelectric point:5,45219
aromaticity:0,09185
hydropathy:-0,13639

Domains

Domains [InterPro]
DC_0129
STR
1–1111
DC_0129
NF040662
Unmapped
279–770
NF040662 IPR015406
IPR055385
ATT
280–382
IPR055385 IPR032876 IPR053171
QIW86450.1
1 1165
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-279 | ATT 280-382 | STR 383-492 | ATT 493-641 | STR 642-1111 | RBD 1112-1137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW86450.1
1 1165
Domain Start End Length (AA) Confidence
N-terminal 1 646 646 0,8256
Central domain 647 1108 463 0,0465
C-terminal 1109 1165 56 0,7742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-646
Central
647-1108
C-terminal
1109-1165

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage AMA1
[NCBI] 		2723726 No lineage information
Host Achromobacter marplatensis
[NCBI] 		470868 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW86450.1 [NCBI]
Genbank nucleotide accession
MT241605.2 [NCBI]
CDS location
range 17390 -> 20887
strand +
CDS
ATGGCAACCCTGCTGCTGATTGAAAACGCTTTCCGCCCAGACGCGAATCCCCGGCAAGAGCCGGTCCGCGCCGGCGAGCGTATCAGCTCCATGCTGCGCCGTATCGGCTACCTGAAGGGCCGCGGTGCGAAAGCGGTGCGTAAAGTCCCGTTCATCGTCGTTCGAAACGGCGAACCGGTCCTTATTGCCCAAATGTCTACGCGCATTAAGGCTAAGGACCATATCAGCGTCATTCACCTGCCAAAGGGCGGTGGTGGCGGGAGCAACCCGCTTCAAATGGTGTTGACGGTGGCTATTGCTGTCGCAGCCGCCTATACTGGCGGTTTGGCTGCTACGGCTTTTGGCTCCCAACTGGCCGGCGCGGCAGTGTCGGCTGCGGTCATGATTGGTGGCACTTTGCTGCTGAACATGTTCTTCCCGCCGCAAATGCCGTCAGCTATGTCCTTGAATCGGGAGAAGGCGAGTCCAACGTACTCGATTTCCTCTCAAGGCAACCAGGCCCGGCTTATGGAAGCTATCCCGGTCCTGTACGGTCGCTTCCGCACCTTCCCCGACCTCGCTTCGGCTCCTTATACCGAGTCGCGAGGCAACGAGACTTACCTGTACCAGCTCTTCTGCATCACGCAAGGGCAAATGGACATCGAGACCATCCAGGTCGAGAACGACAATGTGTCCACGTACGGGGAAATCGAGTACCAGATTGTCAATCCTGGGCAGTCTGTTACCTTGTTCCCGGACAACGTCATTTCCAGCCAGGCCGTCAACAACTTTGAGCTGACGCCGCCGGAGCAGCCTGGCAATATCAAGGGGCCTTTTGCGGTCTCGAATCCTGGTGTACAAGTCAACTATATCGGCATTGACCTGTATCTGCCGGGCGGTGCCTATTACATGAACGACAAAGGGCGGTTTGAAACCTCTCGCGTCAACGTGCAGTTTGAATACCAGGCCATCAATGACGCGGGCGTTCCGTCCGGCAACTGGATGCCCTTGTTCAGCAAGGAATATGCTTTTGCGACCAATACCCCGCAGAGCATCTCCGAGAAGATCGAGGTTCCGCTCGGCCGCTATCAAGTACGCGGATACCGTACAACGGCTGGCCCCGCGGATAACCGTGAAATCAACGTGATCCAGTGGGCTGTCATGCGGGGTTATGCTCCGTCGGTCCGCCAATATGGTGATGTGACTTTGCTGGCCATGATTATCAAGGCCACGAACAACATCAACCAGCAAACCTCTCGTCGTATCAACGTGATTGGCACGCGTAAGCTGCCGGTGTGGGACCCTGTCAACGGCTGGTCTGTCAACCCAGTTGCTACGACCAATCCGGCTTGGGCGGCTGCAGACATCCTGCGCAATACGACCTATGGCCGGCGTCTGCCAACTTCCCGTATCAACATCCAGGAGCTATACCGCCTCTCGCAGGTCTATCAGTCTCGTGGCGATGAGTTCAATGGTGTCTTTGATACCACTTCTCAGCTGTGGGATGCGCTGACGAAAGTCTTGCGGGTGGGTCGGACTGTTCCGATCAACTACGCGGGCCTCATTGACTTTGTGCGCAACGAGCCCAAGACGGTTCCAACCTACATGTTCCAGCCTCAGAACATGGTGGAAAACTCGTTCAGCACTGAATACGCCTTTGCGGAACCGGGCTCTACTCCGAACTATGTTCAAGTTGAGTATATCAACCGTGAAACTTGGGTGTCTGAGACTGTCGACTGCGTGCTCCCGGGCGTCGCGCCTACGATTCCGGCAAAGGTGCAGCTCATGGGCGTCACTAGCCGCGCTCAAGCATGGCGCGAAGGCATGTCCTTGGCCGCCGCCAACCGCGACCAACGCCGTCAAATCAGCTTCTCGACAGGCTTTGAGGGCTATTTGCCTCGCTTCGGCGACCTCGTCCAGATTTCTCACGACGTTCCTCAATGGGGATACTCTGGTGAAGTCTTGGGCTTGAACGCCGGACCGGACAGCGAAGAATATGGCTTGCAGGGTGAACTGACCACTACAGAAGAGCTGGTATTTGTTCCCGGACTGACCCACCAAATCGCGTTCAAGAAGCGTGATGGATCGCCACATGGCCCCTTCAACGTTGTACCGCACCCCTCCGGTCTGTACAACAAGGCCATCGTCCAAGCCTCTGTCGCCCAGCTGCAGCAAATCTACATTTCGGACGGTTTTCGGGAGGAGCTGACGCAGTATCAATTCGGTCCTACCGAACGCCGTGGGCTGCGCGCAATCGCGTTGTCGGCTACTCCGGACAGCGACGGAAAAGTGCTGCTGACGTTCACGAACTACGCAGAAAGTGTCCATGCCGCTGAAAACGGGGGTGTTACTCCTCCTCCTGGCCCAGACTCGAATCTCCCGGGTATCGTCACGGTGCCCGTCATCGATTCGGTCAAGCTGGAGCTGACCCCGTACGCTTGGCAGCAGCTGATCGTGGCTACGCCCGCCCGTGGCGCTCGCTTGTATGAGTATGAGATTAGCCAGGACGGCCTCAATTGGTCCAACCTCGGTACGGCTACGTCTCCTTCGATGCAAGTCAACCTCAGTGGCGGCACCTGGTTTGTCCGAGTGCGTGCTATCGGCAACCTGACTGGCCCTTGGACTACTTGGACTGGTGTCGTTGAGGCGTCTACGCTTCCAGCTTCCCGCGTCGACCACGTTTCCATTACGTCGGTTGTGTTTGGTATCGACCTCGAATGGGCCGTGCGTGAAGACGACTATCTAGCTGCGTCCGTTGAAGTGTACTGGGGAACTACCAATGTGCTCGGCAATGCCACCAGGCTCATTGACATGCCACTGCCAGGGAATAAATTCTCTGTCACGGACCTCGGGCCTGGTGCTGTTCGGTACTTCTGGTTCCGAGCGATTGACGAAGCAGGGCGCGTCGGTCCTTGGTACAACAACGGCGTGGGTCTGATGGGCAAGTCCAGCGATCAAGCTGACATTATCATGGCCTATCTGGACGGCAAGATCACTGAGACCCAACTGGCTCAATCCCTTATCGAGAAGATCGATTCTGGTGGCGGAGCTGCAGTCGAGGTGGAGGCAATCCAAAACGCCTTGGCCGCAATGTATACCATCAAAACGCAGTTGACGGCTGGTGGCCGCACAGCTCTTGCTGGTATCGGTGTTGGTGTCGAAAACAACGACGGTGTGCTAGAATCACAAGTACTTGTGTTGGCAGACCGATTTGCGGTGGGTCGTTCTGATGATGCTACTGGAACTTTCAAGTCCATGTTCATCATCGACAACGGCAACGTGTACATCGACACTGCCTTCATCAAGAACGGTACTATCACAAACCTCATGATCGGGGACATTATCCAGTCCAACGATTATGTTGCGGGGGTATCCGGCTGGCGTCTCCATAAGGGAGCCCAAGGGTTTGAAATGAACGGCACCGGCAACGGTTACCGAGTTCGTCTCACCAACACGGGCTTGTACGTATGGAACACCAACACCGGTGTCCTCTGCGTTGAAGTGGGGCTGCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6548328491a810c0c413743af80619bcc1db7f5a0539d4bf208e8f9f56029487
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2707
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of novel bacteriophages capable of lysing clinical strain of Achromobacter marplatensis Ku,H., Chan,H.T., Brown,T., Kabwe,M., Low,Y.P., Batinovic,S., Petrovski,S. and Tucci,J. 2020-10-08 — GenBank