Protein

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Genbank accession
YP_009152771.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYTTGNGVTATIPFTFPANSASDVYGAINGIDQSVTVVLSPDQINSPGGTLTFNGGAAPLGSNILVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERAGKFLGFDPAGNPHAAAPIRGEDGTDGLPPYISDGTDGFNAGNWVAFSVQDKSYKDTGVRALGIDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADMGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37380,70250 Da
isoelectric point:4,34548
aromaticity:0,09524
hydropathy:-0,32577

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage J2
[NCBI] 		1558467 Uroviricota > Caudoviricetes > Enhodamvirus >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009152771.1 [NCBI]
Genbank nucleotide accession
NC_027393 [NCBI]
CDS location
range 19367 -> 20440
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATACCACTGGTAACGGAGTGACGGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGATGTGTATGGTGCAATCAACGGAATAGACCAATCAGTAACTGTGGTGCTGAGTCCCGACCAGATAAATAGTCCAGGCGGAACGTTGACATTTAATGGCGGCGCGGCTCCCTTGGGTTCGAATATTTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCATATCCAACTAAGGGCAGCTTTCCATCCAAATCACATGAGTCTGCCATGGACAAACTGGTGATGATTGCGCAGGACTTGAACTTCCTTTTAGCATCCCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCGCCGGAAAATTCCTTGGCTTTGATCCTGCAGGCAACCCACATGCGGCAGCTCCAATTCGCGGCGAGGACGGCACGGACGGTCTTCCCCCCTACATCTCGGATGGCACTGATGGATTCAACGCCGGAAACTGGGTGGCGTTTTCTGTTCAAGACAAATCCTACAAAGATACAGGCGTCCGTGCCCTTGGTATTGACGGCTTGCCTCCTTACATCTCGAACGGCACTGACGGGTTTACGTCGGGAAACTGGATTGTCGACGACGGAAGCACTAACTACGTTGACACGGGAGTAAGGGCAAAAGGAGACAAAGGCGACAAGGGTGACGACGCTCTATCGCCTTATGTGTCTGACGGGACTGACGGATTCACCGCAGGAAATTGGGTTGCGGACAATGGCTCTGGTGCTTATGCGGACATGGGGATTGGGGCAAAGGGCGATAAGGGTGACACAGGCGATGACGGTCTACCACCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAACGGCTCTGGTGTGTATGTTGATACAGGTATTCCTGCTCGACCGAATTTGCAATACGCCACGGAAACCACAATCGGCGGCATGCGTTGGTCACTGGTTGGAACTACCTTAAACTTATATTTTACGGACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5cef0a16efcecebc300b0db8c770048951a492c0a59db0ea9cb350618e570080
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of seven Vibrio cholerae phages isolated in China Bhandare,S.G., Warry,A., Emes,R.D., Su,J., Barrow,P.A. and Atterbury,R.J. — — GenBank