Protein

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Genbank accession
QIN95337.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQFPFVGQAYEAPMLLQDAEKCVNWYVEVSQNQESKTPVALLGTPGLNLLLTLGSGPVRGFWVMPGEVTAIAVSGNAVYWITIQTPANATTNAVLQGVQIGTLQTSSGPVVIRDNGAGGIAVIVDGPNGYVVNAKSQTVKQITDPAWLGSDRVRFIDGWLIFNRPGTQTFYTSPIYWDGVQPLNATYFALKDTSTDNLVSHEENNRELWLFGERTIEVWCDAGNPNFPFSRLQGVKLQHGCAAKHSLCRIADSLMWLGKDENGQNVVLRTSGYQAAPVSSIGVNHAIASYPVISDAIAYAYQEDEHWFYVLTFPTADVTWVYDMSTKLWHERLSYDPLAGLFHRHWSNCYMNFAGMRIVGDFQNGNIYQMSRQFYSDNGNPLVAWRRTPHLWDKNNRERVFNQRMQIEFTPGVGLQTGQGQNPQIMMRWSNDGGQTWSNEHWQSVGLVGETKHRAIWRRLGSARDRVYEVKFSDPVPRDVVGASIRAE
Physico‐chemical
properties
protein length:489 AA
molecular weight: 54832,08840 Da
isoelectric point:6,13983
aromaticity:0,11452
hydropathy:-0,30307

Domains

Domains [InterPro]
DC_0229
STR
1–489
DC_0229
IPR021098
STR
120–489
IPR021098
QIN95337.1
1 489
Architecture
STR
STR 1-489
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN95337.1
1 489
Domain Start End Length (AA) Confidence
N-terminal 1 383 383 0,9039
Central domain 384 478 96 0,0390
C-terminal 479 489 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-383
Central
384-478
C-terminal
479-489

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PBR31
[NCBI] 		2718947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95337.1 [NCBI]
Genbank nucleotide accession
MT119766 [NCBI]
CDS location
range 14769 -> 16238
strand +
CDS
ATGCCGCAGTTTCCGTTTGTCGGGCAGGCTTATGAAGCGCCGATGCTGCTTCAGGACGCTGAAAAGTGCGTCAACTGGTATGTAGAAGTCTCGCAAAACCAAGAGTCAAAAACACCGGTAGCGCTGCTCGGAACCCCGGGGCTGAATCTGCTATTGACGCTTGGATCTGGGCCGGTGCGAGGATTTTGGGTGATGCCAGGCGAAGTAACTGCAATCGCAGTGTCTGGGAATGCCGTTTATTGGATAACCATCCAAACTCCAGCCAATGCAACAACGAATGCAGTTCTTCAGGGCGTGCAGATCGGAACACTGCAAACCTCCAGTGGCCCTGTAGTGATCAGGGACAACGGCGCTGGTGGAATTGCGGTAATTGTTGATGGTCCCAATGGCTATGTTGTGAACGCAAAAAGCCAGACCGTCAAGCAAATCACTGATCCTGCATGGCTTGGCTCTGATCGCGTCCGCTTCATCGACGGATGGTTGATCTTCAATCGCCCTGGCACGCAGACGTTTTACACATCGCCGATATATTGGGATGGGGTGCAGCCGCTAAATGCGACTTACTTTGCATTGAAGGACACCAGTACAGACAACCTTGTATCGCACGAAGAGAACAACCGGGAACTATGGTTGTTTGGCGAGCGCACGATTGAAGTGTGGTGCGACGCCGGTAATCCGAATTTCCCTTTCTCTCGCCTGCAGGGTGTGAAACTCCAGCATGGATGCGCAGCTAAGCACAGTTTGTGCCGAATTGCCGATAGCCTAATGTGGCTCGGGAAGGATGAAAACGGCCAAAACGTGGTGCTGCGCACATCGGGCTATCAAGCGGCTCCAGTCTCATCAATCGGCGTAAATCACGCAATTGCGAGCTATCCGGTCATCAGCGATGCGATTGCCTATGCATATCAAGAGGACGAGCACTGGTTTTACGTCCTAACTTTCCCGACCGCTGATGTTACGTGGGTCTATGACATGAGCACAAAGCTCTGGCACGAACGCCTGAGCTATGACCCTTTGGCAGGTCTTTTCCATCGGCATTGGTCGAACTGTTACATGAACTTTGCGGGTATGCGCATCGTTGGAGATTTCCAGAACGGAAATATTTACCAGATGTCGCGCCAGTTCTATTCAGACAATGGCAATCCACTAGTTGCATGGCGCAGAACCCCGCATCTGTGGGATAAGAATAACCGAGAGCGCGTTTTCAATCAGCGCATGCAAATCGAATTCACGCCTGGAGTTGGTTTGCAGACAGGTCAAGGCCAGAATCCGCAAATCATGATGCGCTGGTCAAACGATGGCGGCCAGACGTGGAGCAATGAGCACTGGCAGTCCGTGGGATTAGTTGGGGAAACCAAGCACCGAGCTATTTGGCGCCGCTTGGGTAGCGCGCGAGATCGAGTCTACGAAGTGAAATTCTCAGACCCGGTTCCTCGCGATGTTGTCGGGGCCTCAATCAGGGCCGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3fa4aae3a04f4e2ea161e33c11d71285532a334e928ba7eef60a6b3689ee2480
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50