Protein

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UniProt accession
A0A1V0DX45 [UniProt]
Protein name
Collagen triple helix repeat family protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKPIYFLMLTVMLTMTYGTAKAVEPVRPCNAVNSCTQPDPVPGPPGPAGPAGPAGPKGDTGPAGPKGDTSYAGLSDPGFQNMLQTRTPTAGQVTIAGGLNMNQNYATSVTAAVRYGVTNCFDVVGAVDVDRNENVSAYVGFTMAVNKCSPARYQPIMDDNAAYTGKLK
Physico‐chemical
properties
protein length:168 AA
molecular weight: 17410,61530 Da
isoelectric point:7,59059
aromaticity:0,07143
hydropathy:-0,19464

Domains

Domains [InterPro]
DC_1687
STR
12–161
DC_1687
G3DSA:1.20.5.320
STR
41–95
G3DSA:1.20.5.320
A0A1V0DX45
1 168
Architecture
STR
STR 12-161 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus virus S-ESS1
[NCBI] 		1964565 Uroviricota > Caudoviricetes > Casjensviridae > Sessunavirus SESS1 >
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB05735.1 [NCBI]
Genbank nucleotide accession
KY249644 [NCBI]
CDS location
range 38662 -> 39168
strand -
CDS
ATGAAACCCATCTATTTCCTGATGCTGACTGTCATGCTCACCATGACCTACGGCACCGCCAAAGCCGTGGAGCCTGTGCGCCCCTGCAACGCCGTGAATAGCTGCACACAGCCCGACCCGGTGCCCGGACCTCCCGGCCCGGCAGGACCGGCAGGACCGGCAGGCCCCAAGGGCGACACCGGACCCGCAGGCCCCAAGGGCGACACGTCCTACGCGGGCCTGTCCGATCCCGGCTTCCAGAACATGCTCCAGACCCGCACACCCACGGCAGGACAAGTCACGATTGCCGGGGGCCTGAACATGAACCAGAACTACGCTACCTCTGTGACCGCCGCAGTCCGCTACGGTGTGACAAATTGCTTTGACGTCGTCGGGGCCGTCGATGTTGACCGCAATGAAAACGTCAGCGCGTATGTCGGTTTCACGATGGCCGTGAACAAGTGCAGCCCGGCGCGGTATCAGCCCATCATGGACGACAACGCTGCCTACACCGGCAAGCTGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
24abaa3d12e14ed050c716323c13fdc16e700d41d201991c7cc8abadc6cbbe55
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50