Protein

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Genbank accession
YP_010667272.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNFYYVDPSLKVDGNGTLSSPFNSMDSLVASSWAHPMTILIKRGTSFKWSYLNNSLANLNSVLFCNQSGTQSVLSSYGDGPLPIWYPADETKRHTYTIFQNFYIGDLQLSPTPGVVQTMGYLYGWIKGDSNGLCNMEIGNLRFIGTPESIGKSAGMNEVACILLQADYVSRTNIAHKIYIHDIYGDHVNCGIMVRGNPHLSDTTTFYGDQRKSYGVRILDISFTNIINYGIKLCGATSKNKNKNVRGDEWESGFDGVYYSSYKTNVYNPNTDPKGSTGRADVPIWITMCSYITGQNFEIHGSGPGLPDRQSLDFDYHTNNCTFRYGYCTNNARGPMFIQGPYSNSWYAAQGYTAPSSDPYTLYKTLGCGVINNVIEYVTFYNDGIGRTDEVSTFKWTKPQVYRYCYDNTIRNCLFIDSATRTGDNIVGANPQTDDDATANSLSIDSCIFYWRIRDESDLISSSVVTSFGALLQKISFKNCLIFSKSWATTPSLPGVVTSGILYADPKFKNEIPTVPPSGFKEAMNILRLSSSSPALSAGTINPNPDSWGNTGKNIGWEQ
Physico‐chemical
properties
protein length:559 AA
molecular weight: 61962,63430 Da
isoelectric point:6,08430
aromaticity:0,12522
hydropathy:-0,33041

Domains

Domains [InterPro]
DC_1961
STR
1–559
DC_1961
YP_010667272.1
1 559
Architecture
STR
STR 1-559
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010667272.1
1 559
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4239
Central domain 11 525 516 0,9918
C-terminal 526 559 33 0,9019
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-525
C-terminal
526-559

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Miami
[NCBI] 		2767581 Uroviricota > Caudoviricetes > Chimalliviridae > Miamivirus miami >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010667272.1 [NCBI]
Genbank nucleotide accession
NC_070950 [NCBI]
CDS location
range 92712 -> 94391
strand +
CDS
ATGAATTTTTATTATGTCGATCCTTCTCTTAAAGTAGATGGAAACGGAACGCTGTCATCTCCTTTTAATTCGATGGATTCCTTGGTTGCTTCCAGCTGGGCGCATCCGATGACCATTCTTATTAAAAGAGGGACATCTTTTAAATGGTCGTATTTAAATAATTCCTTAGCTAATCTTAACTCTGTCTTATTTTGTAACCAATCTGGAACGCAAAGCGTTCTTTCTTCTTATGGCGATGGTCCTCTGCCAATATGGTATCCGGCAGATGAAACAAAAAGACACACTTATACCATATTTCAAAATTTTTACATAGGTGATCTTCAACTATCTCCTACCCCTGGCGTGGTGCAAACAATGGGGTATCTTTATGGTTGGATAAAGGGAGACAGTAATGGGTTATGTAACATGGAAATCGGTAATTTAAGATTTATAGGAACGCCTGAATCTATCGGTAAGTCTGCTGGAATGAATGAGGTGGCGTGTATATTGTTACAGGCGGATTACGTCAGTAGGACGAATATCGCGCACAAAATTTACATCCATGACATATACGGAGACCATGTTAATTGTGGAATAATGGTAAGAGGAAATCCACATCTTTCCGATACCACTACTTTTTATGGTGATCAAAGAAAAAGTTATGGGGTAAGAATACTGGATATCTCTTTTACAAACATAATCAATTACGGCATCAAGCTCTGTGGCGCAACCAGTAAAAATAAAAATAAAAATGTGAGGGGGGATGAATGGGAATCCGGATTCGATGGGGTTTATTACTCTTCTTACAAAACAAACGTTTATAATCCAAACACCGATCCAAAAGGTTCAACTGGTCGTGCCGATGTTCCCATTTGGATTACTATGTGTTCTTATATCACGGGGCAGAATTTCGAGATTCACGGATCAGGGCCTGGTCTTCCCGATAGACAATCGTTGGATTTTGATTATCATACCAACAATTGTACTTTTCGATATGGGTATTGTACTAACAACGCCAGAGGTCCGATGTTTATACAAGGCCCTTATAGCAACTCTTGGTATGCTGCACAAGGATATACTGCGCCGAGCTCGGATCCGTACACTTTATATAAGACATTAGGGTGCGGTGTAATAAATAATGTCATTGAATACGTGACGTTCTATAACGACGGAATCGGCAGAACCGACGAGGTTAGTACATTTAAATGGACGAAACCACAAGTTTATCGGTATTGCTATGACAACACCATCAGAAACTGTCTTTTTATCGATTCAGCCACCAGAACGGGTGATAACATTGTAGGGGCGAACCCTCAGACTGATGATGATGCAACCGCTAATTCTCTTAGCATCGATAGCTGTATTTTTTATTGGAGAATAAGAGACGAAAGCGATTTAATCTCATCGTCTGTTGTGACGTCATTTGGAGCCTTACTCCAAAAAATCAGTTTCAAAAACTGTTTGATTTTTTCTAAGTCGTGGGCTACCACGCCATCATTACCTGGCGTGGTTACATCGGGAATCCTTTACGCAGATCCTAAATTTAAAAATGAAATCCCAACTGTTCCTCCTTCCGGATTTAAAGAAGCGATGAATATTTTGAGGTTATCAAGTAGTTCTCCTGCTTTATCCGCGGGTACCATTAATCCGAATCCAGATAGTTGGGGCAACACAGGAAAAAATATAGGGTGGGAACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9abd217c72352b49a1359cafa3f188d56ba51bc2a8f7e63f4e2e8d80ae658c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7087
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae phage Miami Mora,D.A., Lessor,L., Gill,J. and Liu,M. 2021-01-28 — GenBank