Protein

Genbank accession
XOB87523.1 [GenBank]
Protein name
pectin lyase fold/virulence factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDLKKWQDPLMNSELQQDYNDNLVKLAGSLEKANQDMTHVNQRISNLVIKSGGNESNEVVDARVSSLVPETEFTTLNDRINYAENALITGVGKLSTNVFDLMDKYNDIDTILKRLYGLDSSNIEIFVDDARGDDIAGTGEIDAPFKTINKAVMTLPRVLNSNSVNIWIVPGRYNEDVVIPPIMGGDIYIRSTNFETVDPTSSTGCQVRSISATGSNGYLYIAGLEETNTAGTTKNYFIKAIRCGFVRISKCRMAFNTKAIDPFTAVFIDACSADVNGCYFASQNVDVRGYNTARVEVQNIIHGAKSAIGLYPQSADIFNLNSGTWEADTPTKLSGGGVVRT
Physico‐chemical
properties
protein length:341 AA
molecular weight: 37305,46110 Da
isoelectric point:4,83162
aromaticity:0,07918
hydropathy:-0,22053

Domains

Domains [InterPro]
Coil
30–50
Coil G3DSA:3.30.1910.20
IPR011050
124–300
IPR011050
XOB87523.1
1 341
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LMC
[NCBI] 		3397566 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOB87523.1 [NCBI]
Genbank nucleotide accession
PQ869677 [NCBI]
CDS location
range 34977 -> 36002
strand -
CDS
ATGGATTTAAAAAAATGGCAAGACCCACTCATGAACTCAGAACTACAACAAGATTATAACGACAATTTGGTAAAACTAGCTGGAAGCCTTGAAAAAGCTAATCAAGATATGACGCATGTAAATCAACGTATATCTAACTTAGTTATTAAATCCGGCGGAAATGAATCGAATGAAGTAGTAGACGCACGCGTTTCTTCTCTGGTTCCAGAAACTGAATTCACAACATTAAACGATAGAATAAATTACGCGGAAAATGCTTTAATAACAGGTGTTGGGAAGCTCTCAACGAATGTTTTTGATCTAATGGATAAGTACAACGATATAGATACTATTTTAAAGCGTTTATATGGCTTAGATAGCAGCAATATTGAAATATTTGTGGATGATGCAAGAGGCGATGATATTGCGGGGACTGGTGAAATTGATGCACCTTTTAAAACTATAAATAAAGCGGTAATGACTTTGCCCCGTGTATTGAATAGTAACTCTGTGAATATCTGGATTGTTCCCGGCAGATATAACGAAGACGTCGTTATTCCGCCAATCATGGGAGGAGACATCTATATTAGATCTACAAACTTTGAAACAGTAGACCCTACAAGCAGCACCGGATGCCAAGTTCGAAGTATTTCCGCAACAGGCAGTAACGGTTATCTATATATTGCTGGTTTAGAAGAAACTAACACAGCAGGAACAACAAAAAACTACTTTATCAAAGCAATAAGATGCGGTTTTGTAAGAATTTCAAAATGTAGGATGGCCTTCAACACTAAAGCAATAGACCCGTTCACCGCGGTGTTTATTGATGCTTGTTCTGCTGACGTTAACGGCTGTTACTTCGCTTCGCAAAACGTCGATGTGCGCGGTTATAACACTGCTAGAGTCGAGGTTCAGAATATCATCCATGGAGCAAAAAGCGCAATCGGTTTGTATCCTCAAAGTGCCGATATTTTCAATCTCAACAGCGGAACTTGGGAAGCTGATACGCCTACGAAACTGAGCGGCGGGGGAGTGGTTAGAACATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
26f1ca606c0b10a743b497dd9faae947b0c948f2e0f04923d2c5268803c4cc41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8526
Evidence 0,8526
Download PDB

Literature

No literature entries available.