Protein

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Genbank accession
AGG58109.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSEFTGFGKAGSGQPGARGAPGVTPHIGPNGNWFIGATDTGVSAKGESDGRALVAVSQSGNVITFQHADGAKHSITISGGSPAPAGLQSEITTLENKLSSQGVDVSNLKKQFGTLSHHIDSLSGVYSYRGTVGPPSYPKDAKPAYFLNIHNSSGPQLISMPNPDIASADGTVYFLNNENDTSTITINSINGESIDNATHVDVGPLQFRMLVKNGTNWTTTATGYIPSSLSDVTHRVASTLTDELHTKNQILDIINQWVANPSTKGVLDNIMTQLGYTKSAGGNHPKPSEAKVHYGVGDDYPTSFTSETGEFAPHQDLVVNDLDKNPKKVWIAVPDSYKNKVAGIVANNGLAAAWPSKDVTIDSNQWTVFISPTALADDHISFSIKWSV
Physico‐chemical
properties
protein length:388 AA
molecular weight: 41045,94310 Da
isoelectric point:5,76077
aromaticity:0,07474
hydropathy:-0,33093

Domains

Domains [InterPro]
G3DSA:2.60.120.220
ATT
7–65
G3DSA:2.60.120.220
DC_0845
STR
29–388
DC_0845
AGG58109.1
1 388
Architecture
ATT
STR
ATT 7-65 | STR 66-388
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage douglas 12A4
[NCBI] 		573171 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aliivibrio fischeri
[NCBI] 		668 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58109.1 [NCBI]
Genbank nucleotide accession
HQ316580.1 [NCBI]
CDS location
range 53756 -> 54922
strand -
CDS
ATGAGCGAATTTACAGGATTTGGTAAAGCAGGATCTGGTCAACCTGGTGCTAGAGGTGCGCCGGGTGTTACTCCTCATATTGGGCCTAATGGTAATTGGTTTATAGGTGCAACTGATACAGGTGTAAGTGCAAAAGGAGAAAGCGACGGAAGAGCTTTAGTTGCAGTATCTCAAAGTGGTAACGTTATTACATTTCAGCATGCTGATGGCGCTAAACATTCGATCACTATTAGTGGTGGATCTCCAGCGCCAGCAGGTTTGCAAAGTGAAATCACAACACTGGAAAATAAATTATCAAGTCAGGGTGTAGATGTATCAAACTTAAAAAAACAATTTGGAACATTAAGCCACCACATAGATAGTTTATCAGGGGTATACAGTTACAGAGGAACTGTAGGGCCTCCGTCATATCCAAAAGATGCTAAGCCAGCATACTTTCTTAATATACATAACAGTTCAGGACCGCAATTAATAAGCATGCCAAACCCTGATATAGCATCAGCTGATGGTACTGTATATTTCTTAAATAACGAAAACGACACTTCAACCATTACCATTAACTCAATTAATGGCGAGTCAATAGATAACGCAACTCACGTTGATGTAGGTCCTTTGCAGTTTAGAATGTTAGTAAAAAATGGAACTAACTGGACAACAACCGCAACAGGCTACATCCCTTCAAGCTTATCAGATGTAACTCACAGAGTAGCATCAACCCTAACAGATGAACTTCATACTAAAAATCAAATACTAGACATCATAAATCAATGGGTAGCTAACCCATCAACTAAAGGTGTACTTGATAACATTATGACTCAGCTAGGGTATACAAAATCAGCTGGCGGTAATCATCCAAAACCAAGCGAGGCAAAAGTGCATTATGGTGTTGGTGATGATTATCCTACTTCCTTTACTTCAGAAACTGGCGAGTTTGCTCCTCACCAGGACCTAGTAGTTAATGATCTGGATAAGAACCCTAAGAAGGTTTGGATTGCTGTTCCTGATTCTTATAAAAATAAAGTGGCTGGAATAGTGGCAAATAACGGACTAGCTGCAGCTTGGCCAAGTAAAGATGTAACTATTGATAGTAATCAATGGACTGTATTTATTAGCCCAACAGCTTTGGCAGATGATCATATATCATTCAGTATTAAATGGAGTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
735749725c463b5d4789c2f8917d5cd131035f14146c4e5dbcb4522d8ef5c7cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage douglas 12A4 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank