Protein

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Genbank accession
AIX19095.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MPQSNTTAVLDNGVLTVTTDQRPEPALYGTPLGSGNFPNNPNTVDGQDGSFAFAIRAGTNTEDPHPTTLGPQGIALNGVVLFSPSNGAGALPGQTVLPAEGFSWNTVFNESTFGVDACGGHARQNGEYHYHSGSFLVNCWGNDAIQSNVYYSSSQHKGNFFRHPDGHSKIIGFCFDGYPIYGPFGYESVEDRTTGTKKLRSSFRILTTPADGRGYSYSQYTAGSFIQDYEYVNGLGDLDEFNGRYCQTPEYPDGTYAYFLSLDEQNNPVYPYIFGPTTKEQRTWPEEGSEDGYGGANASLSDADILRITKTWSEATFNYDSVVSIPAEPPEGSPPLPSRLPVTILLHDDGGNGSNTVNKWRSVLPGDILVAPTGYISKWNIVDENKAPDMNYLIQLIRNLREYPNVAPDQFRIVGTSNGGALALRAFLELNDVGLTTVVAELSSLHINQWRNGVWYAPQTNEDTASANDSYGYTRAITPPTGRKIMTIANTNDTIIPYDGGVGGVPNTIFYGAQFSAQILAESQGYTGDQLGDAQGVQYNSTYPDIYLYKYFNNSVVHVKSNTGHNTNAGHETLIRQYIESGGTSAG
Physico‐chemical
properties
protein length:587 AA
molecular weight: 63766,03890 Da
isoelectric point:4,70146
aromaticity:0,11584
hydropathy:-0,46985

Domains

Domains [InterPro]
DC_1006
ATT
1–59
DC_1006 IPR025924 DC_1015 IPR029058
IPR025924
STR
60–270
IPR025924 IPR029058
IPR029058
RBD
340–579
IPR029058
AIX19095.1
1 587
Architecture
ATT
STR
RBD
ATT 1-59 | STR 60-317 | RBD 318-579 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX19095.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 300 300 0,5046
Central domain 301 561 262 0,8011
C-terminal 562 587 25 0,3363
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-300
Central
301-561
C-terminal
562-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014d
[NCBI] 		1493509 Uroviricota > Caudoviricetes > Pantevenvirales > Lowelvirus > Lowelvirus tuscon4d
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX19095.1 [NCBI]
Genbank nucleotide accession
KJ019048 [NCBI]
CDS location
range 65776 -> 67539
strand +
CDS
ATGCCGCAATCAAATACCACAGCAGTATTAGACAACGGGGTGCTGACAGTTACTACTGATCAGCGTCCCGAACCTGCTTTGTATGGAACCCCCTTAGGATCTGGTAATTTTCCAAATAATCCAAATACTGTAGATGGCCAAGATGGGTCATTTGCGTTTGCTATTAGGGCAGGAACTAATACAGAAGATCCACATCCAACTACTTTGGGACCTCAAGGTATAGCATTGAATGGGGTAGTTCTATTCAGTCCATCAAATGGTGCTGGAGCTTTACCTGGACAAACTGTTCTTCCTGCTGAAGGTTTTTCGTGGAACACTGTGTTTAACGAAAGTACATTTGGAGTTGATGCATGTGGTGGGCATGCTAGACAAAATGGAGAGTATCACTACCACTCTGGTAGTTTTCTTGTAAATTGTTGGGGTAATGATGCAATCCAATCCAACGTATACTATAGTTCATCTCAACATAAGGGAAACTTCTTTAGGCATCCAGATGGACATTCAAAAATTATAGGATTCTGTTTTGATGGATATCCAATCTATGGTCCTTTTGGATATGAAAGCGTTGAGGATAGGACTACTGGTACAAAAAAATTAAGGTCATCTTTTAGAATTTTAACGACTCCTGCTGATGGTAGAGGATATAGTTATTCTCAGTATACTGCAGGAAGTTTTATTCAAGACTATGAATATGTAAATGGTCTTGGAGATTTGGATGAATTCAATGGTAGATATTGCCAGACACCAGAATATCCAGACGGAACATATGCTTACTTCTTGTCGTTAGACGAACAAAATAATCCAGTGTATCCATACATCTTTGGACCTACAACTAAGGAACAGAGAACGTGGCCAGAAGAAGGTTCTGAAGATGGTTATGGTGGAGCAAATGCATCTCTCAGTGATGCTGATATTCTTAGAATTACTAAAACTTGGTCAGAAGCAACTTTTAATTATGATTCTGTAGTTAGTATACCAGCAGAACCCCCTGAAGGATCACCACCACTCCCTTCACGATTGCCTGTAACCATTCTGTTACATGATGATGGTGGAAATGGTAGTAACACTGTAAATAAGTGGAGGAGCGTTCTTCCTGGAGACATTCTAGTAGCACCTACTGGTTATATCAGTAAGTGGAATATTGTGGATGAGAATAAAGCTCCTGATATGAACTACCTAATTCAACTAATTAGAAACTTGAGAGAGTATCCTAACGTTGCTCCAGATCAATTTAGAATTGTGGGTACATCAAATGGTGGAGCTTTGGCACTCAGAGCATTCTTGGAATTAAATGATGTTGGTCTCACTACAGTAGTTGCTGAATTATCTTCTCTACATATCAATCAATGGAGAAATGGTGTTTGGTATGCACCACAAACCAATGAGGATACTGCATCTGCAAATGATTCCTATGGATATACTAGAGCAATAACTCCCCCAACAGGGAGAAAAATTATGACTATTGCAAATACTAACGATACTATTATTCCATATGACGGTGGAGTTGGTGGTGTTCCAAATACTATATTCTACGGAGCGCAATTTAGTGCTCAGATTCTTGCTGAATCTCAAGGTTATACTGGAGATCAACTGGGAGATGCTCAGGGTGTGCAATATAACTCAACTTATCCCGACATATACCTCTACAAATACTTTAATAATTCGGTAGTTCATGTCAAGAGTAATACTGGACATAACACTAATGCTGGTCATGAAACTCTGATTCGTCAGTACATTGAAAGCGGCGGAACATCCGCTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43f6b2ea32234df1c0658d14054478a7b373e60bb828210207a03d186b9ec0b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7363
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank