Protein

Genbank accession
YP_009811534.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,51
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLTKINPALIDGGASPVGKVLGKKTATAVAFIDPAEAAKIPGSQGVEFDTTTGTLTVIWPDGSQSSVIGLPTADQLKSGREGKQGKEGLRGLPGADGRDGRDGEDGCPGPRGPRGRNGPTGNTGPVGATGNTGAVGPTGATGPTGSPGRDAAIDEYRVSQALNPVTGAVIPNAWIGSNRDMNTGFTHNMGRVVNASTTDTIHVVFNTAFINRCISIQITFVNAALNQAKTYQLYNLDGTSAMNENALLGGFTIKSTGTNTAGWDFWYTAVGD
Physico‐chemical
properties
protein length:273 AA
molecular weight: 27921,68280 Da
isoelectric point:6,13312
aromaticity:0,05861
hydropathy:-0,29780

Domains

Domains [InterPro]
PTHR24637
54–151
PTHR24637
IPR008160
80–134
IPR008160
YP_009811534.1
1 273
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_AD1
[NCBI] 		2283029 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009811534.1 [NCBI]
Genbank nucleotide accession
NC_048054.1 [NCBI]
CDS location
range 65674 -> 66495
strand -
CDS
ATGTCTCTTACGAAGATTAATCCTGCACTTATCGACGGCGGTGCTTCGCCTGTCGGTAAAGTGTTAGGTAAGAAGACGGCGACCGCTGTTGCGTTTATCGACCCAGCAGAGGCTGCAAAGATTCCCGGCTCTCAGGGTGTTGAGTTCGACACAACTACAGGTACGCTAACAGTCATCTGGCCTGATGGCAGTCAATCGAGTGTGATTGGTTTGCCTACTGCCGACCAGCTTAAATCAGGACGTGAAGGTAAACAGGGTAAAGAAGGTCTGCGTGGCCTCCCTGGTGCTGATGGTCGTGATGGTCGCGACGGTGAAGACGGCTGTCCAGGACCTCGTGGGCCTCGTGGACGTAACGGTCCTACAGGTAACACAGGCCCTGTAGGTGCTACAGGTAACACTGGTGCTGTCGGCCCTACGGGTGCAACAGGACCTACTGGTAGCCCAGGCCGCGATGCTGCTATTGACGAGTATCGTGTGTCTCAAGCGCTCAACCCTGTTACCGGTGCAGTGATACCGAACGCATGGATTGGTAGCAACCGCGATATGAACACTGGCTTTACTCATAACATGGGTCGAGTCGTGAACGCATCAACTACCGACACAATTCATGTTGTGTTTAACACGGCATTCATCAACCGTTGTATCAGCATTCAGATTACCTTTGTGAACGCTGCACTCAACCAAGCGAAGACCTACCAGCTCTACAATCTGGATGGTACAAGCGCGATGAATGAGAACGCCCTGTTAGGCGGCTTCACCATCAAGTCTACTGGCACCAACACTGCTGGCTGGGACTTCTGGTATACTGCGGTAGGTGATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
19b0b2237b5754cc827a66fe07138d2d3adab2612864a2941dc8f8ad031bc598
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6942
Evidence 0,6942
Download PDB

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank