Protein

View in Explore
Genbank accession
XAO16658.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTDSQGFQKEVEFKKGVKISATFPGGSNLNGLYSGNGDGASREKANMDLRSWYGIGIWNSCTGDGFQGRTIWFNVRRGTVETLGDIVSGRQVISNASGPTGPAHLTRKDYVDGAINNVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:229 AA
molecular weight: 24676,90100 Da
isoelectric point:7,80159
aromaticity:0,10480
hydropathy:-0,52882

Domains

Domains [InterPro]
DC_0466
STR
1–227
DC_0466
IPR005601
STR
85–203
IPR005601
XAO16658.1
1 229
Architecture
STR
STR 1-227 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO16658.1
1 229
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,3221
Central domain 205 218 15 0,0589
C-terminal 219 229 10 0,9020
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-218
C-terminal
219-229

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FL12
[NCBI] 		3128053 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO16658.1 [NCBI]
Genbank nucleotide accession
PP400786.1 [NCBI]
CDS location
range 85240 -> 85929
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAACAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGCACAGATTCTCAAGGTTTCCAAAAAGAAGTAGAATTTAAAAAAGGTGTTAAGATTTCTGCAACGTTTCCTGGCGGTTCAAACCTGAATGGGTTATATTCTGGCAATGGAGATGGAGCTTCCAGAGAAAAAGCTAACATGGATTTACGTTCATGGTACGGCATTGGTATTTGGAACTCATGCACAGGTGATGGGTTCCAGGGACGCACAATCTGGTTTAATGTCAGGCGTGGTACAGTTGAAACACTTGGCGATATTGTTTCGGGCCGGCAAGTTATTTCTAATGCTTCAGGACCGACCGGCCCAGCACACTTAACTCGCAAAGATTATGTTGATGGAGCAATAAATAATGTTACAGCAAATGCGAACTCTAGAGTGTTGCGTTCTGGTGACACTATGACAGGTAATTTAACGGCGCCAAACTTTTTCTCGCAGAATCCCGCATCTCAACCTTCACATGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
749967673488535c26a2154119983ef32d1fe5d2daa685391a25954ea1b3f54b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank