Protein

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Genbank accession
QCW23951.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MSFFAGRLNNVPTFSLKNEGGGDINRHINPDDNTLFHSSMPHVLITEEYEAQLQQRDYGYWTCAMPGRISSLLANDANLVVLTEVEYYVGNTICRRMLYGGATGVGAANWQSQWVSIQIIGSRPITIPHFFGAFGTTFVASNDVIADHGFFSESNPGGNVSQKLLYGTGRKLMWSGSSTWESSQGASNTYFEGGQTVPNSPNYYFDVGHLIPPSGAQRGFDSFYIKAGHPRLEMFYRNAATGSTSNPQPPQLPAGTVGYQLHTFSNRYNGGGGVALDAGQAAALAPNDFSYTNSSVRRDGEAREINYGFGFAKVRWYVTNLRYNGWGYDVTYQPFAGNSILLSPKNFVIKDVNLMNTSFKFINLVSPGNGWNRPDMHLTSPNIYRGNVQSGLEAGDIPWNGVETGGMGAGYWYGAGSNWGSTTLALYKFQPSASWYVNSTVPSIGNQWGDVWSPGQIPLRLFGNRAAVVEVSGGAFQLSANQVTGIQNANLGLNDSRNGAVVMTIVFNDITWFLASGRGVYNPMRWNGGGSLPASQMRVTGYGNSTYHIRHQILSLPVGGYVPFYVCRCGSMASYGSDGSSLADHSTGFYTVIFYIRNIGNGEVEFSCELAGNPIVSIPGGSQNDSSKVLGDYNAIRLPSMRITVQRLV
Physico‐chemical
properties
protein length:649 AA
molecular weight: 70560,83300 Da
isoelectric point:7,18765
aromaticity:0,12635
hydropathy:-0,23544

Domains

Domains [InterPro]
IPR059609
RBD
1–648
IPR059609
QCW23951.1
1 649
Architecture
RBD
RBD 1-648 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW23951.1
1 649
Domain Start End Length (AA) Confidence
N-terminal 1 89 89 0,0724
Central domain 90 288 200 0,4017
C-terminal 289 649 360 0,7331
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-89
Central
90-288
C-terminal
289-649

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagS_AAS21
[NCBI] 		2575261 Uroviricota > Caudoviricetes > Demerecviridae > Keyvirus AAS21 >
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW23951.1 [NCBI]
Genbank nucleotide accession
MK770119 [NCBI]
CDS location
range 114691 -> 116640
strand +
CDS
ATGAGTTTTTTCGCCGGACGATTAAATAATGTCCCAACATTCTCCCTGAAGAATGAGGGTGGGGGTGACATAAACCGCCACATAAACCCTGATGACAATACACTTTTTCACTCTAGTATGCCACACGTACTGATTACTGAAGAGTATGAAGCACAGCTACAGCAACGTGACTATGGTTACTGGACCTGCGCCATGCCGGGTAGAATCTCTAGCTTACTAGCAAACGACGCCAATTTAGTAGTTTTAACAGAAGTAGAGTATTATGTAGGTAACACCATTTGTAGACGTATGCTTTACGGTGGGGCTACAGGAGTTGGTGCAGCTAACTGGCAAAGCCAGTGGGTTTCAATACAAATTATCGGATCTAGGCCAATTACTATTCCACACTTCTTTGGTGCATTTGGTACTACGTTTGTTGCTAGTAACGACGTAATTGCTGATCATGGATTCTTTAGTGAGAGTAACCCCGGTGGTAACGTTTCGCAGAAGCTGCTATATGGAACAGGCCGTAAACTGATGTGGTCTGGATCTAGTACTTGGGAAAGTTCTCAAGGTGCTTCTAACACTTATTTTGAGGGTGGACAGACGGTTCCTAACAGCCCAAATTACTACTTTGATGTAGGTCATCTTATTCCACCTTCTGGTGCACAACGTGGTTTTGATAGTTTTTATATTAAAGCTGGTCATCCTAGACTTGAGATGTTTTATAGAAACGCTGCAACAGGTAGTACATCTAACCCACAACCACCTCAATTACCTGCGGGTACTGTTGGTTATCAGTTACATACGTTCTCTAATAGGTATAACGGAGGTGGGGGTGTAGCCTTAGATGCAGGTCAAGCTGCTGCGTTAGCGCCTAACGACTTCAGTTATACTAACAGCTCAGTAAGACGCGATGGAGAGGCAAGAGAAATAAACTATGGGTTTGGGTTTGCCAAAGTAAGATGGTATGTTACCAATTTACGTTACAATGGTTGGGGTTATGATGTTACTTATCAACCTTTCGCAGGCAATAGTATTCTCCTGAGTCCTAAGAACTTCGTTATTAAAGACGTAAATTTAATGAACACATCGTTTAAGTTTATTAATCTAGTGTCTCCAGGTAATGGCTGGAATAGGCCTGATATGCATCTTACTAGTCCTAATATCTATAGAGGTAACGTACAGTCTGGCTTAGAAGCTGGTGATATCCCATGGAATGGTGTAGAAACTGGAGGTATGGGAGCAGGATATTGGTATGGGGCGGGAAGTAACTGGGGTTCTACTACTTTAGCCCTGTATAAATTCCAACCGTCTGCATCTTGGTATGTTAATAGTACTGTGCCATCTATAGGTAACCAATGGGGTGATGTATGGTCTCCGGGTCAAATACCCTTGAGATTGTTTGGCAACCGAGCTGCCGTTGTAGAAGTAAGTGGTGGTGCTTTCCAGTTATCCGCAAACCAAGTAACAGGAATACAGAATGCTAATCTAGGTCTTAATGACTCTAGAAACGGTGCTGTAGTAATGACTATTGTGTTTAACGATATTACATGGTTTTTGGCAAGTGGTCGTGGTGTTTACAACCCAATGCGCTGGAATGGTGGAGGTAGTTTACCTGCTAGTCAGATGCGTGTTACTGGATACGGTAACTCTACTTATCATATTAGACACCAGATACTGAGTCTACCTGTGGGAGGTTACGTACCTTTCTACGTTTGTAGATGTGGTTCTATGGCAAGTTATGGTAGTGATGGTAGTAGTCTAGCGGACCATAGTACGGGCTTCTACACTGTAATATTTTATATTAGGAATATAGGTAATGGTGAGGTAGAATTTTCCTGTGAGCTAGCAGGTAACCCTATTGTAAGTATTCCTGGCGGATCACAAAATGATTCATCGAAAGTTTTAGGCGACTATAACGCTATACGTTTACCAAGTATGCGTATAACTGTACAAAGACTAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5d267d5c835bb4666e256bf79b0c2a7208d7f85647bb1ac7758266cca91f59b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea bacteriophage vB_PagS_AAS21 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2012-05 — GenBank