Protein

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Genbank accession
QWY83771.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSELPLINAIPRFKGNEDRVNKLVNGTALETWQTSEGVTLPTFAKFLADKDEEISEASDAAEAAAASAASAAASAAIVATYATRAAASAVNLSAYTEVRINRWSATSHYAPAAYKKVAVEPTHTAKFQSLDGAWWELNDTIVDLRSFGAMQDNIADDSAALILATSFSNRLIIVSNLGSAIKVAGTIPVYGQILGIGNPNFALTVAGGVDRGFDLQSNSVLDGITITRGPTGSSASGEYNNAFVVGRYVNQLGTETRNVTVRNVNLIGIDAGVGRRSITGIYGNVCDSTFENITITGWVSYGIMCHWGGNHEEADPNASTVIASWHPRRLTFRNIRMHSPQPDAALGVLYLSATHDILVDGLSSDGVRNPITIAPGDVGGVVAQGESVGRILQNILVRNVDINNYEGTGFVISGASGLRAGARWLGINEKMSIRLENITIKRGALSTSGRMIDARLVTNLTIDGYNLSHGSGADSAIYTPALFIQACNNVKAKGRSHVPMAWEAVGSTNVEIDSQDVCLRTDYQTSAVGGRITAEAGAHSLGAALAVNDTTITLTALNFDIVAGSPIAVGGGYVVASAAAIEQATSIVIPIYPSPVSAASASAATVRKACKRYNLLGSTEGFYYGLHIVNTNSGYTEDVRVSRHFYRNGLHDIYARGTRHLKVDKSTFEACNQIDSASGNNIRFIDTAVGTVVTDCTFEDNLSGTTKCFHNIYLFGNSEGSIVKGNKFHRALTSAINYFLPTGVEMWADLGNNYFASTLAARITGTAIVRGSNVGMRVIGFATAIPTSGTWTKGDILFNEGAAASAGLGWICVTSGAPGTWKSIGTIAA
Physico‐chemical
properties
protein length:829 AA
molecular weight: 87372,07450 Da
isoelectric point:6,17035
aromaticity:0,07720
hydropathy:0,05018

Domains

Domains [InterPro]
DC_1322
ATT
1–182
DC_1322 DC_1462
IPR011050
STR
133–416
IPR011050 IPR011050
IPR011050
STR
133–405
IPR011050
IPR012334
STR
142–517
IPR012334
QWY83771.1
1 829
Architecture
ATT
STR
ATT 1-182 | STR 183-829
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83771.1
1 829
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9864
Central domain 155 770 617 0,9903
C-terminal 771 829 58 0,9701
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-770
C-terminal
771-829

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X3_15
[NCBI] 		2836087 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83771.1 [NCBI]
Genbank nucleotide accession
MW960038.1 [NCBI]
CDS location
range 61971 -> 64460
strand -
CDS
ATGTCTGAACTTCCCCTTATCAATGCTATTCCTCGTTTTAAGGGGAATGAAGATCGAGTTAATAAACTCGTTAATGGTACAGCATTGGAAACTTGGCAAACGAGTGAGGGGGTAACACTCCCTACCTTTGCTAAGTTTCTTGCTGATAAAGATGAAGAAATTAGTGAGGCATCTGATGCTGCTGAAGCTGCGGCAGCGTCTGCCGCTTCTGCTGCTGCCAGTGCTGCAATAGTTGCCACTTATGCAACTCGTGCTGCCGCTTCTGCTGTAAATCTTTCAGCTTACACTGAGGTACGTATTAATCGTTGGTCTGCTACCTCTCATTATGCTCCAGCAGCATATAAGAAGGTTGCCGTTGAACCTACTCATACAGCTAAATTTCAAAGCCTGGACGGAGCATGGTGGGAACTTAATGATACCATTGTGGATCTTCGATCCTTTGGAGCTATGCAGGATAACATTGCAGATGATAGTGCTGCACTCATCCTTGCTACTTCATTCAGCAATCGACTGATTATCGTTTCCAATCTTGGCTCTGCAATCAAGGTAGCTGGAACAATTCCAGTCTATGGACAGATCCTTGGTATCGGAAATCCTAACTTTGCTCTCACTGTAGCTGGTGGTGTAGATCGAGGTTTTGATCTTCAATCGAATTCTGTTCTCGATGGGATTACAATCACTCGTGGACCTACAGGAAGCTCTGCATCGGGCGAGTACAATAATGCTTTTGTTGTTGGTCGTTATGTGAACCAACTTGGTACAGAGACTCGTAACGTCACTGTCAGAAATGTTAACCTTATTGGTATTGATGCTGGTGTAGGTCGTCGTAGCATTACTGGTATCTATGGTAACGTTTGTGATTCCACCTTTGAGAACATCACCATTACTGGGTGGGTCTCTTATGGTATCATGTGCCATTGGGGTGGTAATCATGAAGAGGCAGATCCTAATGCTTCTACGGTAATTGCTTCTTGGCATCCTCGTAGGCTTACCTTCCGTAATATTCGGATGCATAGTCCACAGCCTGATGCTGCTCTAGGCGTACTTTACCTTTCTGCTACCCATGACATCCTAGTAGATGGTCTGTCCTCGGATGGAGTTCGTAACCCAATCACCATTGCTCCTGGTGATGTTGGTGGCGTTGTTGCTCAGGGTGAGAGTGTAGGACGTATCCTTCAGAACATCCTGGTTCGTAATGTCGATATCAATAACTATGAAGGCACTGGCTTTGTAATCTCTGGTGCTTCCGGTTTGCGTGCTGGTGCTCGTTGGCTTGGTATCAACGAGAAGATGTCTATTCGTTTGGAGAATATCACCATCAAGCGTGGTGCTCTCAGCACATCAGGACGAATGATTGATGCTCGTTTGGTCACCAATCTGACTATTGATGGGTATAATTTGAGTCATGGTTCTGGTGCAGATTCTGCCATCTATACCCCAGCTTTGTTCATTCAAGCTTGTAACAATGTGAAAGCTAAAGGCAGATCCCATGTTCCTATGGCTTGGGAAGCTGTAGGTTCTACAAATGTAGAGATTGATTCTCAAGACGTGTGCTTGCGTACTGATTATCAAACCTCTGCTGTAGGTGGTCGTATTACTGCTGAAGCTGGTGCTCATTCTCTAGGTGCAGCACTCGCGGTAAACGATACAACAATCACCCTTACTGCTTTGAATTTTGATATTGTGGCAGGATCACCAATTGCTGTTGGTGGAGGGTATGTCGTTGCATCTGCTGCTGCCATTGAGCAGGCAACTTCAATTGTGATCCCGATTTACCCAAGCCCGGTATCTGCTGCCAGTGCTTCTGCTGCTACAGTACGAAAGGCATGTAAAAGGTATAACCTTCTTGGTTCCACTGAAGGATTCTATTACGGTCTACATATCGTCAATACCAACAGTGGTTACACAGAAGATGTCCGAGTAAGTAGACATTTCTACCGCAATGGTCTTCATGACATTTATGCTCGTGGTACACGTCACCTCAAAGTAGATAAAAGCACTTTTGAAGCTTGTAACCAGATTGACAGTGCATCAGGTAATAACATCCGCTTCATTGATACTGCTGTCGGTACAGTGGTTACTGATTGTACCTTTGAAGATAACCTCTCTGGTACAACAAAATGTTTCCATAACATTTACTTGTTTGGGAACTCTGAAGGATCCATCGTTAAGGGTAATAAATTCCACAGAGCTTTGACTTCAGCTATTAACTATTTCCTCCCAACAGGTGTGGAAATGTGGGCTGATCTAGGCAACAACTATTTTGCCTCTACTCTTGCTGCTCGTATAACCGGAACAGCTATTGTCAGAGGATCTAATGTTGGTATGCGGGTAATTGGTTTTGCAACAGCAATTCCAACATCCGGTACATGGACTAAGGGTGACATTCTCTTTAATGAAGGTGCTGCTGCTAGTGCTGGATTGGGATGGATCTGTGTGACTTCAGGTGCTCCAGGTACTTGGAAGTCTATAGGAACAATCGCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9bd960ddc01b73d7c85ebe83643e594911165cfef52b3d46c7a68efeab670454
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Juarez,S. 2017-09-25 — GenBank