Protein

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Genbank accession
PQ035139.1_CDS_[27236..29266] [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGPLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVAQRMDKGYKPNINDLDIWDSLPDHIKNQTAGATLRVMSGSNITLNSPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHHTSAWGYGNWVIGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDINADTGPQVERVDDYPLSQYPWFKLPTKHIIRNIITRDCMGIGAWWDGQNNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVLIHAYTTQGYAVYAPQSEISAVACAGNGTKKILCTYVGDVQGGNINVQHSENQMTLAMRPAMGGTINPSLVMTADCQVALPGGEASIVKLSAIQGGVRVGELQLNRLGFKHMSIPVASSQLPDSALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73247,22080 Da
isoelectric point:5,31327
aromaticity:0,09024
hydropathy:-0,24527

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
PQ035139.1_CDS_[27236..29266]
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
PQ035139.1_CDS_[27236..29266]
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9953
Central domain 156 563 409 0,9830
C-terminal 564 676 112 0,8556
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-563
C-terminal
564-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HBW_1
[NCBI] 		3237673 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PQ035139.1_CDS_[27236..29266] [NCBI]
Genbank nucleotide accession
PQ035139.1 [NCBI]
CDS location
range 27236 -> 29266
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
92f3164075e86a865a49b4ea779cf0f64233c0c09831551c9d2df16558760383

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7108
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50