Protein

Genbank accession
AFV81358.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLTTIIDDLISKVNNAFGVIDGKLRGKAEKTEVYTRTYLDNPVNTLGANAATASQLKAARLIALGGDAQGSAGFDGSANITLLVTVPELANKADKLDTLTPAEIDSRIQAVISTAPAALDTLKELADALGNDPNFAGTITTELAKKANLVDVYTMTAADAKFLTKTGKAADTTLFAGKAESHFATKTEHDGLSSDLSSALQQLATAFQNGADQISGVGQ
Physico‐chemical
properties
protein length:220 AA
molecular weight: 22745,23530 Da
isoelectric point:4,81156
aromaticity:0,04545
hydropathy:-0,05591

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaM_MAR
[NCBI] 		1229754 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV81358.1 [NCBI]
Genbank nucleotide accession
JX556417 [NCBI]
CDS location
range 12338 -> 13000
strand +
CDS
ATGTCTCTGACCACGATTATTGATGACTTGATCTCGAAGGTAAACAACGCCTTCGGGGTAATTGACGGCAAGCTGCGAGGCAAGGCCGAAAAGACCGAAGTATACACCCGGACTTATCTGGATAACCCGGTGAATACATTGGGTGCCAATGCTGCCACCGCCAGCCAGTTGAAAGCTGCCAGGCTGATTGCTCTGGGTGGTGATGCACAAGGTTCAGCGGGGTTTGATGGTTCTGCCAATATCACCCTGCTGGTGACGGTGCCGGAGCTGGCGAACAAGGCGGACAAGCTGGATACCCTGACACCGGCTGAAATTGACAGCCGTATTCAGGCGGTGATCTCAACCGCACCAGCGGCGCTCGATACCTTGAAAGAACTGGCGGATGCGTTGGGTAATGACCCCAACTTTGCCGGGACCATTACCACTGAGCTGGCCAAGAAGGCCAACCTGGTGGATGTGTACACCATGACGGCAGCGGATGCCAAGTTTTTAACCAAAACCGGCAAAGCCGCAGACACCACCCTGTTTGCGGGTAAGGCGGAAAGCCACTTTGCCACCAAAACCGAACACGATGGCCTGTCGTCTGACTTATCAAGCGCACTGCAGCAGCTGGCCACGGCTTTTCAGAATGGCGCTGACCAAATCAGCGGTGTAGGACAATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
98ed64b35e2c2937faa95e1b346e0e861186189797e067bbb51771e296c624cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8066
Evidence 0,8066
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage vB_VpaM_MAR Alanis Villa,A., Kropinski,A.M., Abbasifar,R. and Griffiths,M.W. 2012 23118463 GenBank