Protein

View in Explore
Genbank accession
ARB12500.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MNQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVAGDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDGQYYSLNLNDLGQFDAKGTKIINLGAPTSPQDATTKLYVDTNDAALSQRILDEIKARAEGDIEMLRQAKMYSDSQIPGVLPDGATSVGYWLPSATALMNDDSGHPVVRVRGFYTADDGGEGSWVWTNEVDAQKAGTHDILTASVYDKVGRRYRIDITIGAVNAAQNGARRLTYEQATDRNTDDFVCLGQVISGITSLMPLPVSTNNSESGYIGDYRINLTISPGRYRIGKESGGIDSGMVINAWGARVHVVAGKSYTRAITGKWIHGLVHGYDQIKRKWEAVGKQAFWGSVSLKDVVINGGFWIGDHDLRTPASECSAGVGTLLLNPEGVIMNGVHQRNFNWVHVAMGAMIEETWYRTSKGRLFDDNELDYPYVMDFMTSNVPPVTRRFGNFNRVAYHGCKFESGRRGVFRSGVDWSGCYNTEIINSIAWRNPANADGSLPEFIAVLTGTAFHMSAGYMGPAAAKDFNAGVASVYSSTQNIKFDATYTEWTYAFMMISSWGFVDSASRLQGLSLDLVSVYKDNFADYGQIIFEEGCFPTMSEDGSATYPAGFKHFDTPQGQSPYVIGKPVRDVGAFRNQGFDFKYATNNVYLTAGTDWESWRDRPYAREMFNAFGLQINSGTAFLPLQNPADKSMTCIWYKDFTGNFNTRKVIQFITAAAQEGPNADEALYKSYAERVVDFGNGYKMMMIPNKRLTAWDGIYTYARNASITVEVSADTPIALIAVEAYTGGVPLFPNGVPNYVPESSCASVVPTAPQVGFDSNLGGGLFFNGDVVGPWVHVRRNKVGRRITPQVTAGSVLSTRRVRGQGVTLESALKTTFTATIISSNADTTTISIPTASLPSVAVGIPLYVQSGSSTGFTGLAHLHLRVMLANGKADNKYVVNGKLGEAGDNLTIDQSQIAAYTLLADFTQTAITAETMTLSGVARASAFRASVGVDVGYGGSSGPKVVAFYFNGGTTSTHAITATSLNGMSVNANGNLSINGHTFSTQDGTHTLGTAQHRWAAVWSANGTLQTSDERFKILDGDIPEELLDAWEKYVKVKVYRMKSAVSLKGPDARKHVGYIAQHVIEALTQAGLDWTKYGVVGFDEWDANEFGPAGDRYSLRYDQCAAIENAVLDRRIRRLEELLLNK
Physico‐chemical
properties
protein length:1242 AA
molecular weight: 135856,86730 Da
isoelectric point:6,08140
aromaticity:0,10467
hydropathy:-0,22262

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604 cd02795
DC_0778
STR
1–658
DC_0778 IPR044914 IPR036388
cd10144
CHP
1127–1231
cd10144
IPR030392
CHP
1127–1242
IPR030392
IPR030392
CHP
1127–1188
IPR030392
ARB12500.1
1 1242
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-658 | RBD 1061-1242
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB12500.1
1 1242
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,9876
Central domain 294 1021 729 0,9857
C-terminal 1022 1242 220 0,9038
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-1021
C-terminal
1022-1242

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_BIS33
[NCBI] 		1907782 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB12500.1 [NCBI]
Genbank nucleotide accession
KY652725.1 [NCBI]
CDS location
range 34192 -> 37920
strand +
CDS
ATGAACCAAGACATTAAAACAGTCATTCAGTACCCAGTGGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTTTCCCGCAAGTTCGTCAGAGTGTCACTAGTAGCTGGCGACAACCGCAGACTGCTGAGTAATATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACTACCGGGTTCGACCGTGTGGAAATTCGCAGATTCACCTCAGCTTCAGAGCGTGTAGTAGACTTCAGTGATGGCTCGGTTCTCCGTGCAGCCGACCTTAACGTATCTCAAATACAGTCGGCACATATCGCAGAGGAAGCACGTGACGGTCAGTATTACAGCCTCAATCTTAACGACCTCGGACAGTTTGACGCTAAGGGTACTAAGATTATTAACCTAGGTGCGCCAACGTCCCCACAAGATGCCACAACGAAACTGTATGTGGACACTAACGACGCGGCCCTTAGCCAGAGAATCCTCGATGAAATCAAAGCGAGAGCCGAGGGGGACATTGAGATGCTCCGTCAGGCAAAAATGTATTCCGACTCTCAGATTCCTGGAGTTTTGCCGGATGGGGCCACGTCTGTCGGTTACTGGTTACCATCTGCAACAGCACTGATGAATGATGACTCTGGACACCCTGTGGTTAGGGTCCGTGGGTTCTACACTGCCGATGATGGCGGCGAGGGTAGTTGGGTGTGGACCAACGAGGTAGATGCTCAAAAGGCTGGGACCCACGACATTTTAACAGCATCGGTGTATGATAAGGTAGGTCGACGCTACCGTATCGACATCACCATTGGGGCTGTAAACGCAGCACAGAACGGCGCTCGCAGATTAACCTACGAACAAGCTACCGACAGGAACACAGACGACTTCGTGTGTCTAGGTCAGGTAATCTCTGGTATCACCTCACTGATGCCACTCCCAGTATCAACTAACAACAGTGAGAGTGGATACATTGGTGATTATCGAATCAACCTAACGATATCTCCGGGCCGCTACCGTATCGGTAAAGAGTCTGGTGGGATTGACTCGGGCATGGTAATCAACGCGTGGGGCGCACGAGTGCACGTTGTTGCTGGTAAGTCTTACACCAGAGCAATTACTGGTAAGTGGATTCACGGTCTGGTGCACGGATACGACCAGATTAAACGTAAGTGGGAGGCTGTTGGTAAACAAGCATTCTGGGGCAGTGTTTCCCTGAAGGATGTGGTAATCAACGGCGGCTTCTGGATTGGTGACCACGACCTGCGGACTCCGGCTTCCGAGTGCTCTGCTGGCGTTGGTACGCTCCTACTGAACCCTGAAGGCGTAATCATGAACGGTGTGCACCAGCGCAACTTCAACTGGGTCCATGTCGCTATGGGAGCAATGATTGAGGAGACTTGGTACCGCACTTCGAAAGGTCGTCTCTTTGATGATAACGAACTTGACTACCCTTACGTTATGGACTTTATGACCTCTAACGTTCCGCCAGTTACTCGCCGCTTCGGTAACTTCAACCGCGTGGCATATCACGGGTGTAAATTCGAAAGTGGACGTCGTGGCGTGTTCCGCAGTGGCGTTGACTGGTCTGGGTGCTACAACACCGAAATCATCAACAGCATCGCGTGGAGAAACCCGGCTAACGCGGACGGAAGTCTTCCAGAGTTCATCGCCGTACTTACTGGTACTGCGTTCCACATGAGCGCTGGTTACATGGGTCCTGCGGCAGCCAAGGACTTCAACGCAGGGGTTGCCTCTGTCTACAGTTCTACCCAGAACATTAAGTTCGACGCTACGTACACCGAGTGGACTTATGCTTTCATGATGATTTCCTCATGGGGCTTTGTAGATTCAGCAAGTCGCCTTCAAGGCCTCTCTCTGGACCTTGTGTCTGTGTACAAGGATAACTTTGCGGATTACGGTCAGATTATCTTTGAGGAAGGATGTTTCCCGACTATGTCCGAAGATGGCTCAGCTACTTACCCCGCTGGCTTTAAGCACTTCGACACGCCTCAAGGGCAATCTCCGTATGTTATTGGCAAGCCTGTACGCGATGTTGGTGCGTTCCGTAACCAAGGGTTCGACTTTAAGTACGCAACCAACAACGTATATCTGACAGCTGGAACCGATTGGGAGTCGTGGCGAGACCGTCCATATGCCCGAGAGATGTTCAATGCGTTTGGCTTACAGATTAACTCTGGTACGGCCTTCCTACCGTTGCAGAACCCAGCAGATAAGTCTATGACCTGCATCTGGTATAAGGACTTCACTGGGAACTTCAATACCAGAAAGGTTATCCAGTTCATCACTGCTGCCGCACAAGAGGGGCCTAATGCCGACGAGGCTCTTTACAAGTCATACGCAGAGCGTGTTGTTGACTTTGGTAATGGCTACAAGATGATGATGATTCCAAACAAGAGACTGACGGCATGGGATGGTATCTACACCTACGCACGCAACGCAAGCATCACGGTGGAGGTGTCAGCAGATACTCCTATCGCACTGATTGCTGTCGAAGCGTACACTGGTGGTGTACCACTGTTCCCTAACGGTGTCCCTAACTACGTTCCGGAATCTTCATGTGCCAGCGTGGTACCAACAGCGCCTCAGGTTGGGTTCGACTCTAACCTTGGCGGCGGTCTCTTCTTTAACGGTGACGTTGTAGGCCCTTGGGTTCACGTTCGTCGTAACAAGGTTGGCCGCAGGATTACCCCTCAGGTTACTGCTGGTTCCGTATTGTCCACACGTAGAGTGCGTGGTCAGGGTGTCACCTTAGAGTCTGCCCTGAAGACAACGTTCACAGCGACGATTATTAGCTCTAATGCTGATACTACGACAATCTCCATCCCAACTGCGTCCCTCCCATCGGTGGCAGTAGGCATCCCGCTGTATGTGCAGTCAGGTTCATCCACTGGATTCACTGGGCTTGCCCACCTGCACCTCAGGGTGATGCTGGCTAACGGTAAGGCGGACAACAAGTACGTTGTTAACGGTAAGCTTGGGGAGGCTGGTGATAACCTCACTATTGACCAGTCTCAGATTGCCGCTTATACGCTTCTTGCTGACTTTACACAGACTGCCATCACAGCCGAGACCATGACTCTCTCCGGTGTTGCGCGTGCGTCTGCGTTCAGGGCCTCTGTAGGTGTGGACGTTGGGTATGGTGGTAGCTCTGGGCCTAAGGTTGTGGCTTTTTACTTTAACGGCGGTACCACTTCAACTCACGCCATCACGGCAACTTCCCTTAACGGAATGAGTGTTAACGCCAACGGTAACCTCTCAATCAACGGTCACACGTTCTCTACGCAGGACGGTACGCACACACTGGGTACTGCGCAGCACAGGTGGGCGGCTGTATGGTCCGCTAACGGAACGCTCCAGACGTCCGATGAGCGCTTTAAGATTCTCGATGGGGATATCCCCGAAGAGCTTCTTGATGCTTGGGAGAAGTACGTGAAGGTTAAAGTGTACCGTATGAAATCTGCGGTCTCCCTGAAGGGTCCTGATGCTCGTAAGCACGTTGGATATATTGCCCAGCATGTGATTGAGGCATTGACTCAGGCAGGACTCGATTGGACGAAATACGGTGTGGTTGGTTTCGATGAGTGGGATGCTAACGAGTTTGGTCCGGCAGGTGACCGCTACAGCCTTCGCTATGACCAGTGTGCTGCCATTGAGAACGCTGTGCTGGACCGCAGGATTCGCCGTCTTGAGGAGCTTCTGCTAAACAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ca606f703e73050112ecee5764c40d42df68dcffa6fd9690935efb736321acc1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing and assembly of Klebsiella pneumoniae phages Labudda,L., Strapagiel,D., Karczewska-Golec,J. and Golec,P. 2017-11-09 — GenBank