Protein

View in Explore
Genbank accession
XYU01462.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSIFSKITGAISSFQSVMGLISSTFATDVVCIMDEDGRQVFETARALRAMCQDDSELFQHPLENGNKITDFKIDKPKVVQLGVIIPSDDYGYSYTQLAHAKELGTTFTVQTKARTYNNMVIQAMPHEEGEQWGDCIAVSITFVEVQWYQATIETLPAKEVAVSPKSKAAGGNAKPDADTVKSGQQRGKDASAANSAKANSVLYDWTH
Physico‐chemical
properties
protein length:207 AA
molecular weight: 22608,17940 Da
isoelectric point:5,20352
aromaticity:0,08213
hydropathy:-0,28164

Domains

Domains [InterPro]
DC_1370
STR
1–206
DC_1370
IPR048494
ATT
56–151
IPR048494
XYU01462.1
1 207
Architecture
STR
ATT
STR
STR 1-55 | ATT 56-151 | STR 152-206 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage RF1
[NCBI] 		3455188 Viruses > unclassified bacterial viruses >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYU01462.1 [NCBI]
Genbank nucleotide accession
PV942687.1 [NCBI]
CDS location
range 25562 -> 26185
strand -
CDS
ATGAGCATCTTCTCGAAAATAACCGGGGCGATTAGTAGCTTCCAGTCTGTAATGGGGCTTATCTCTTCGACCTTTGCTACAGACGTCGTTTGCATCATGGATGAAGACGGTCGTCAGGTATTTGAAACAGCCCGCGCTCTGCGGGCCATGTGCCAGGACGACTCAGAACTATTTCAGCATCCGCTTGAGAACGGTAACAAGATTACCGACTTCAAAATAGATAAGCCGAAAGTGGTTCAGCTTGGTGTCATTATACCGTCAGATGACTACGGCTATTCTTACACTCAGCTAGCCCATGCTAAAGAGCTGGGCACTACCTTTACCGTGCAGACAAAAGCGCGGACGTACAACAACATGGTTATTCAGGCCATGCCGCATGAAGAGGGAGAACAGTGGGGCGACTGCATCGCTGTATCGATTACTTTCGTAGAGGTTCAATGGTACCAGGCTACGATAGAAACTTTGCCGGCTAAAGAGGTTGCTGTGTCCCCTAAATCGAAAGCTGCAGGGGGTAACGCTAAGCCAGATGCTGACACTGTTAAGTCGGGCCAGCAAAGAGGTAAGGACGCTTCGGCTGCTAACTCGGCCAAAGCAAATTCTGTATTATACGACTGGACACACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
82d0043dc6a7394e3cd1113c555f15209a0af549c57bbbfb1666dd8dceede308
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50