Protein

View in Explore
Genbank accession
YP_009603973.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MTCSNKPNYTPFKLQGLAPTKQWGLGRSASYERFNPNEFHALEDEVKITFPVDFRGKVKGNSNPNPSRGFSHASQIYRENVLRGSQFLSKPSLLFNGAVYNEKTLYNGAMVASTQEVNQGLMFYWEDFINPDPRIKEGDMVTFSVDVRSTGEDIPTGAVAFKGTSNFEEYYKVLEQPITKEFTRISFTTRFLSKEWEWDEAFGMFWGVENVPVTDYPMFQYDKDKLVGFIQAQESVQLEFSRPMVSTIGKTAYIESGDDMFSNNKWDWSKAVSKGRLNEFDGKYNTNGIKQDWAMPEFIPIFKGSERIHFYKKTTLTETTDAGHGYGKILFYSAANEDSYMNVYKKFPHEAGVYGGYAAEVEVPIGATHYRVHITSERGKATTEAYVQSSANDWSEFSQEWYDGLSGKLDGKTARAETFYRKEMVEMEFELHFAEAVQKALPNIFKGLTTDAEKQQRLRDIAYQFDSTMIARGRGQGNNLADWIFYRWAPDGSIEEQTMKQFRGEGLTSVTHPSSYQEWINPQGRIVTSLRSNRIIPNSMYMGTDTLSGKYDPKLTTLQLEVNGELVDKKATLDKTSEVFTFTGLKGFLKPEDKVRIAGWNNRNNQWSITYSNVLMGNTPENVAEFNERAFVEADYLVTNMSVIVTQSQMDEWGFNPNLPDYRIESLERPASRTEEYMINSMVQVTHAYDIYGFVESNYPEFFGDCYTFDDRIRKINERIKQFNIVATTYSEEPWEDGNPTIFISAEARNPDRDYDVKAEINQTVELQINNSKGHFIHPNGYIYVGFARMPRSDRETGISVEAELSFDFTMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNTLTPINGGTRRYNFGATEDARYISMDCFIKAPAEEDMPKLMEELADFLDVGETVIQFSDNKDRYYKVMLDGSTDLSQTLHVGTLTLTFVLLENTAIGEEVVESFDIDSTTGSVPFIELENMGTADAYPTYQLTFEEPVGYVDLIGTDTSANVSIGRRPKDNEDEVKVDLRPRKFYSKFTSTDGAGWTAMNDTHLPQIEGYQTKLQGTVQRVNGMANQDKWNYGDTSHRGWHGAGIIANLQKNLDDFYMEASIVATGKPVKTSANAIFLIFYDENNTPYAYTKVGTRPQEGNLDSYVAYAGDWGKRKVVNNGAKWKDFWGKVSVQRRDNRWRLIVGQYKDRRYSPSPEASFNFGQNMLKDTRDTGWFDLPPETWGKKFARVGIFFGQYSHRPKLGHLSVRRLIVWENLEEYGETPLEGTPIMFHEGDTVVIDSSKAQTYLNGELTPSLVDPMTDWFPITKGDNYIGVNNFKGKIDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 152280,34940 Da
isoelectric point:5,21739
aromaticity:0,13083
hydropathy:-0,59872

Domains

Domains [InterPro]
DC_0142
STR
1–822
DC_0142 IPR006520 G3DSA:2.60.120.860
DC_0077
STR
691–1330
DC_0077
G3DSA:2.40.30.200
ATT
820–940
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
862–937
IPR008841
YP_009603973.1
1 1330
Architecture
STR
ATT
STR
STR 1-819 | ATT 820-940 | STR 941-1330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009603973.1
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,8316
Central domain 17 246 231 0,5739
C-terminal 247 1330 1083 0,2064
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-246
C-terminal
247-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage IMEEF1
[NCBI] 		1351735 Uroviricota > Caudoviricetes > Saphexavirus >
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009603973.1 [NCBI]
Genbank nucleotide accession
NC_041959 [NCBI]
CDS location
range 47006 -> 50998
strand -
CDS
ATGACATGTTCTAATAAACCTAATTACACTCCGTTTAAATTACAAGGTCTAGCCCCTACTAAACAGTGGGGCTTAGGCCGTTCTGCTAGTTATGAACGGTTTAACCCAAATGAGTTTCACGCCTTAGAGGACGAGGTTAAGATTACTTTCCCAGTGGACTTTAGAGGAAAGGTTAAAGGAAACTCTAACCCAAACCCTTCACGAGGATTTAGCCACGCCAGTCAAATCTACCGTGAAAATGTTTTAAGAGGAAGTCAATTCCTTTCTAAGCCTTCATTACTATTTAATGGAGCAGTATATAATGAGAAGACACTTTACAATGGAGCTATGGTAGCCTCTACTCAAGAAGTTAACCAAGGATTAATGTTCTATTGGGAAGACTTTATCAATCCTGACCCAAGAATTAAAGAAGGTGACATGGTAACTTTCTCAGTAGATGTCCGAAGCACTGGAGAAGATATACCAACAGGAGCTGTGGCCTTCAAAGGAACTTCTAACTTTGAGGAATACTATAAAGTCCTTGAACAACCTATCACAAAAGAGTTTACAAGAATCTCATTCACAACTCGTTTCCTATCGAAGGAATGGGAATGGGACGAAGCCTTTGGGATGTTCTGGGGAGTAGAGAATGTTCCTGTTACAGATTACCCAATGTTCCAATATGACAAGGATAAGTTAGTTGGATTTATTCAGGCTCAAGAAAGTGTTCAACTAGAGTTCTCACGGCCTATGGTTTCAACTATCGGAAAGACTGCTTACATTGAGTCTGGGGACGACATGTTCTCTAACAACAAATGGGACTGGTCTAAAGCCGTATCTAAAGGTCGTTTAAATGAATTTGATGGTAAGTATAACACAAACGGAATCAAACAAGACTGGGCAATGCCTGAGTTCATTCCTATTTTCAAAGGCTCTGAGAGAATCCACTTCTACAAAAAGACTACCCTAACGGAAACAACGGACGCTGGACATGGCTATGGTAAAATCCTATTCTACAGCGCTGCTAACGAAGATTCTTACATGAATGTATATAAGAAGTTCCCTCATGAGGCTGGCGTATACGGTGGATACGCTGCTGAAGTAGAAGTGCCTATTGGAGCTACTCACTACCGAGTTCATATAACTTCAGAAAGAGGAAAGGCCACTACAGAAGCCTATGTACAATCTTCTGCTAACGACTGGTCAGAGTTTAGCCAAGAGTGGTACGACGGACTGTCAGGAAAGCTAGATGGAAAGACTGCCAGAGCTGAGACATTCTATCGTAAAGAAATGGTTGAGATGGAGTTTGAGCTACACTTTGCGGAAGCTGTACAGAAAGCTTTACCAAACATCTTCAAAGGACTTACTACTGACGCTGAGAAGCAACAAAGACTTCGTGATATTGCTTATCAATTCGATTCAACAATGATTGCACGAGGCCGTGGCCAAGGCAATAACTTAGCTGATTGGATTTTCTATAGATGGGCTCCTGACGGCTCTATTGAAGAGCAGACAATGAAGCAGTTTAGAGGCGAGGGTTTAACTTCAGTTACCCATCCGTCAAGTTATCAAGAATGGATTAATCCACAAGGTAGGATTGTAACGTCTCTACGCTCTAACCGAATCATTCCTAACTCAATGTATATGGGAACTGATACGTTAAGTGGTAAGTACGACCCTAAATTAACAACGCTTCAGTTAGAAGTTAATGGGGAGCTTGTTGATAAGAAGGCTACCTTAGATAAGACCTCAGAGGTATTTACATTTACAGGTCTTAAAGGATTCTTAAAGCCTGAAGATAAGGTTAGGATTGCTGGATGGAATAACCGTAACAACCAATGGTCAATCACCTACTCTAATGTTCTTATGGGAAACACTCCAGAAAACGTTGCAGAGTTTAACGAACGAGCTTTCGTTGAAGCTGATTACCTAGTTACAAACATGTCTGTTATCGTAACTCAATCACAGATGGATGAATGGGGATTTAACCCTAATTTACCAGACTACCGAATTGAGTCGCTAGAGCGGCCAGCAAGTCGTACTGAAGAGTACATGATTAACTCAATGGTACAAGTAACACATGCCTATGATATCTACGGATTTGTTGAAAGCAACTACCCTGAGTTTTTCGGAGACTGCTATACCTTTGACGATAGAATAAGAAAGATTAATGAGCGAATTAAACAGTTTAACATTGTCGCTACTACTTATTCAGAAGAGCCTTGGGAAGATGGTAACCCGACAATCTTTATCAGTGCTGAGGCTAGAAACCCTGACAGAGACTACGATGTTAAAGCTGAGATTAACCAAACAGTTGAGCTTCAAATTAACAATTCTAAGGGACACTTTATTCATCCTAACGGTTATATATACGTGGGATTCGCTCGTATGCCAAGAAGCGACCGTGAGACAGGAATCTCTGTAGAAGCTGAATTAAGCTTTGACTTCACGATGGACAGACAGTACGACAGCCTTCCAAGAGTCTTCCGATACAACTATCAGAAGCAGCCTTGGTTCTTGTTTGTAAGAAACATTAACAGAAGCGTTCTTGCACCTAAAGTAAACACTCTAACTCCTATTAACGGAGGCACTAGACGTTATAACTTTGGAGCTACAGAAGACGCTCGGTATATCTCAATGGACTGCTTTATCAAAGCTCCTGCTGAAGAGGATATGCCTAAGTTGATGGAAGAGCTTGCTGACTTCCTAGACGTTGGAGAAACGGTAATCCAATTCTCTGATAACAAAGACCGCTACTACAAGGTTATGTTAGATGGCTCGACAGACCTTTCTCAAACGCTTCATGTAGGAACGTTGACACTGACTTTCGTACTGCTTGAGAATACAGCCATCGGTGAAGAGGTTGTAGAAAGCTTTGACATAGACAGCACGACAGGTTCAGTTCCATTCATTGAGCTTGAGAACATGGGTACGGCAGACGCTTACCCAACCTACCAACTGACCTTTGAAGAGCCTGTAGGATATGTTGACCTAATCGGTACCGACACCTCCGCCAACGTGTCAATTGGAAGACGCCCTAAAGACAATGAAGACGAGGTTAAAGTAGACCTTCGTCCACGTAAATTCTACAGTAAGTTTACCTCTACTGATGGAGCTGGTTGGACGGCCATGAATGACACTCATTTGCCACAGATTGAAGGATACCAAACTAAGCTCCAAGGAACTGTTCAAAGAGTTAATGGAATGGCAAATCAAGACAAGTGGAACTATGGTGACACTAGCCACAGAGGCTGGCATGGAGCGGGTATCATAGCTAACCTTCAAAAGAATCTTGACGACTTCTATATGGAGGCTTCCATTGTAGCTACAGGAAAACCAGTTAAGACTTCTGCCAATGCCATTTTCTTGATATTCTATGATGAGAACAATACTCCATACGCTTATACTAAAGTTGGTACACGGCCTCAAGAAGGTAACTTAGATAGCTACGTAGCTTATGCTGGTGACTGGGGTAAACGTAAAGTGGTTAACAACGGAGCTAAGTGGAAAGACTTCTGGGGCAAGGTTTCAGTACAGCGTAGAGACAATCGCTGGAGACTTATCGTAGGCCAGTACAAAGACCGTAGATACAGCCCTTCACCTGAAGCTTCATTTAACTTTGGTCAAAACATGTTGAAAGATACTAGAGACACAGGTTGGTTCGACTTACCTCCAGAAACTTGGGGTAAGAAGTTTGCAAGGGTTGGAATCTTCTTCGGACAGTATTCACATCGACCTAAGCTAGGCCACTTATCAGTACGTAGACTAATTGTGTGGGAAAACCTTGAGGAGTATGGAGAAACTCCTTTAGAAGGAACTCCAATCATGTTCCATGAGGGTGACACAGTTGTAATTGACTCAAGCAAAGCTCAAACATACCTTAACGGAGAGCTTACTCCATCACTTGTAGACCCTATGACCGACTGGTTCCCAATTACCAAAGGCGATAACTACATTGGAGTAAACAACTTCAAAGGCAAGATTGACATAGTATATAACGAACGATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
375bf912b2b9b64a076a547f4fd59264ad96dd92555aca9605c2b49f098b1e3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5819
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Enterococcus faecalis Phage IME-EF1 and Its Endolysin Zhang,W., Mi,Z., Yin,X., Fan,H., An,X., Zhang,Z., Chen,J. and Tong,Y. 2013 24236180 GenBank