Protein

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Genbank accession
YP_001039670.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSLDANSLIHHYKRGDDAEEYFVILQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPSLDNKGLVYVAYANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNVLVVDNSNGANYALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATMPHVLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTSGEAVVASRTSRFFDFFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGTEKVQNAWHKWSFPAGTVLHAVSYSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNATTRVWTSSALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNASNNTISTNFDLAEGNTATIVVGETYWYEVEPTPPLIKDSKDRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPLRRKSTDVSFKIRSKSPATFQLRDIEWTGSYNPRKRRV
Physico‐chemical
properties
protein length:806 AA
molecular weight: 89380,19530 Da
isoelectric point:5,43491
aromaticity:0,10298
hydropathy:-0,29901

Domains

Domains [InterPro]
IPR058003
TTP
3–806
IPR058003
YP_001039670.1
1 806
Architecture
TTP
TTP 3-806
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001039670.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9934
Central domain 143 359 218 0,0952
C-terminal 360 806 446 0,2440
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-359
C-terminal
360-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Era103
[NCBI] 		418443 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Eracentumvirus
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001039670.1 [NCBI]
Genbank nucleotide accession
NC_009014 [NCBI]
CDS location
range 26968 -> 29388
strand +
CDS
ATGGAAGTTCAAGGGTCATACGGTCGCCAGCTTCAAGGCGTATCTCAACAACCCATCGCGGTTAGGTTGCCGGGGCAGGTCACATCTCAGCTTAACGCAGTGCCGAATGTGGTTGATGGCCTTAAAACTCGCATGGGTTCTAAGCACCTGGCCCGTATCCTCAACAGCCTGGATGCAAACTCCCTTATTCATCACTACAAACGCGGTGACGATGCGGAAGAGTATTTTGTTATCCTACAGCCGGGACAAGTTCCTGTCATCTTCACGGTTGGTGGGCTTGCATGTCCGGTCAATACCCAAGGGTCTGCCGCTACATACCTGAGTTCATCAAGTCTCCCGCGTGAGACAACTCAGTTAATGACCATTGGTGACTATACCTTTGTACTTAACCGTAAGATGCCAGTGCAGGCCAGAGGTGACGTAACTCCTTCCCTGGATAACAAGGGCCTGGTGTATGTTGCCTATGCCAACTTCAGCTTTACCTATCAGATTCTTATCAATGGACAGGTGGCTGCTGAGCACAAGACCGCTTCCTCTGAGGACGTGAAGAACGAAGACCTGGTAAGGACAGATTACGTTGCTGGTAAGTTGTTAGAAAACTTCAACTCAAGAACGGCAAGTTTCCCAGGCTTCTCTATGTATCAAGATGGCAATGTGTTGGTAGTGGATAACTCCAATGGTGCCAACTATGCGCTTACTACGGTGGACGGTGCGGATGGGCAGGACCTTGTGGCTATCCGTCATAAGGTGACTAACCTGGACACCCTGCCTAACCGTGCGCCTGTGGGATATAAGGTTCAGGTCTGGCCTACTGGCAGCAAGCCTGAATCCCGCTATTGGTTACAAGCTGAGTCTCAGGATGGTTCTAAGGTTACATGGGTGGAGACTATCGCACCTGGAGTCAGGAAGGGTTGGAACGCAGCAACTATGCCTCATGTGCTAGTGCGTGAAAGCCTGAATGCCAACGGGTCTGCTAACTTCACATACCGACCTGGGGAATGGGAAGATAGGGATGTAGGGGATGACCTTACTAATGACTTCCCATCATTGCTCAATGACTCGTCACCTCAGCCTATCTCTTCAATGTTGATGGTACAGAACCGTCTCATGCTCACATCGGGAGAAGCGGTGGTGGCTAGTCGTACCTCTCGATTCTTTGACTTCTTCCGGTACACAGTGCTTGCTACGGTAGACACTGACCCGTTTGATGTGTTTGCAGATATTGAAGAGGTCTATAACATCCGTTGGTCTGCACAGATGGATGGTGACGTTGTACTGTTTACTTCTGACCAGCAATTTACATTGCCAGGAGATAAGCCTCTCACACCAACCTCAGCAGTTATCCGCCCTGTGACTCAGTTCAAGATGACACCTGGTGTTAAGCCAGCACCATCCGGTGACTCCATCCTGTTTGCTTTCGACCAAGGTTCATACAGTGGCATCCGTGAGTTCTTCACAGACAGCTACTCTGACACCAAGAAGGCACAGCCTGCAACAAGCCATGTGGATAAGTACATCCGTGGTAAGGTTCTTGAGTTGTCTGCTAGCTCTAGCTTTAACCGTGCCTTCATCATTACATCACCCGACCGTAACATCCTTTATGTTTATGATTGGCTGTACGAAGGGACGGAGAAGGTTCAGAACGCATGGCATAAGTGGTCATTCCCAGCAGGGACAGTTCTACACGCGGTCAGTTACTCAAATGAGAAGCTGTACCTAGTGCTCACCAGGACCAACACGTCTGGTGGCGTAGCAGGTGTCTACATTGAGGTGATGGACATGGGTGACGAACTTGAGTATGGATTGCAGGACAGGGTTCGTATGGACAGACGTGCAACCTTGAGCATGACCTACAACGCCACAACGAGAGTCTGGACCTCTTCAGCATTGCCGTGGCTACCACAGGACCTTAGCTCACTTGATGCAGTCTTAGTGTCAGGGTGGGCAGGGTATGTGGGTGGTGCTTTCCAGTTCAGCTACAATGCCAGTAATAACACTATCTCCACTAACTTCGATTTGGCTGAGGGCAACACAGCAACCATCGTTGTGGGGGAGACGTACTGGTATGAGGTTGAGCCAACACCACCTTTAATTAAGGATAGCAAAGACCGGGTTTCTTACCTGGACACACCGACTGTAGGTAACGTCTACCTTAACCTGGACATGTACCCTGACTTCTCAGTGGTAGTTACAGACAAGGAGACGCTGCAAGAGCGTACCGTGTATCTGGCTAACAAAACTGCTGGCTCTATCACAAACGTTATCGGGTACATTGCACCGCATGAAGGGACTCTTAGAATTCCACTTCGCCGCAAGAGTACCGATGTGTCCTTTAAGATTAGGTCCAAGTCACCTGCAACCTTCCAGTTGCGGGATATTGAATGGACTGGTTCTTATAACCCACGTAAGCGGAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a21ae7f3db8f3812cd546f6ff8b90de89edaa38e3c81947a03ad9050c39e81ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Erwinia amylovora phage Era103, a new member of the T7 superfamily related to SP6, K1-5 and K1E Summer,E.J., Thilaganathan,N., Hall,J., Vidaver,A.K., King,M.D., Robinson,S., Young,R. and Gonzalez,C.F. 2010-01 — GenBank