Protein

View in Explore
Genbank accession
XHB24370.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTAGNLNVDGTTTLKDNVTISPNKAINFEASDLSGALVRHITGKCANNDGWYIGAGGASDQGFLEIGTYDNGNEPIYFVQRTGGTTQAEVRRLALLDGFGDTSIPGDLRLTGKTVKISNGSTLTLEMGVGSNDAYIKNLRGAGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYTISAATAGTPRWVKVATIKHPGDASSQLDLMITGGIDSGHGRHYVDFITLSGRNLTSWSTNSLDNWVEWRRVGSPSKTNVPEYYVVKNDSATDSEASFDFYAKVPRYGNALYVTVLNTAGYNGQDSGKVIIYETGQDTGATTPSGSILVSMKQIFDSLAKPDFGDTTGTLPVNRGGTGATNVGDARNNLGLRTAAVRDVGESSGNVMEVGAFGVGGGGKSIVDITSDVDLMNRLKAIGGTTFRANVKTVNGKAEYTGSPYYSHGAGFFSRTGDTMAALNIDYSSGNVRVFAINDRGLADGKVSYNMLYGTSNKPNADDNDFVSKSRGGTFGADVTVSGDITANTVSGRVLKLSGGGAAYVPPSQGAYISWNKENGSGRTDFINHRSNTSTVPGGFDFWNYEGNTSNMRHLAQIRNTGDLVLFPSDISKAVTFQTDGNIVGGTLFGGNLNNYLSNLTGTANSKVSKSGDTMTGRLNVYQSDTNAGAQAIYIKGVQHTPVVLERNTDANLSIAFRLTGVNPILQRKLGLAKDGTLRWGTGDNQTDNALVFDQNSIGMVRVNMTGGYLGQEVAEDIGGRTLSIDDLFLNSSDVGTRRVYSCLAQGPGANITGMPPALTNLQGDFILIVEKMRSAAGVDFRNKQTFISGRNNKTYFRYGAGTGTTSAPAVNWTPWEEVITTSNTNGILPISSGGTGANTAADARNNFNLGLGQTATFGGLIVNGVGNNDPVVTFKNGAVIREAQGGSIGALIMSASTTASAAAKYIAFRPYGDTSNSEIRVKAYGNNETMLEWAQGPAVRSNTAGAFVIYAKAGQAIHLRPNGDTASQSTVIDQTGKMTVGGEFEAQNSKITGNLNVSEDNRMIVLGKNSDIGLVKKNGMPGKMAIGKSNSFTVMVSANTNNQINPADTFSDIFKVDASGNQTVYGNAQINRQLTVTSNTNLNSDLIVKGNSRFSGVINADGNINVASGKFVIAGQAPTDNSHLTNKKYVDDKVASAISNAGDTYLPLAGGTVTGNLDVTGTRLKTWQLEVDGKSTLRGGLDVSSSLKVSSGNLVAADTTNAGGLFAKNGNVYCDAGSAGTNSNYWFRDSAGNVRGVIWSNGQNGDMIIRNQSGRELVFRNDGYLQLAHLAPGNTDNANTVNGIRLQRGDTIFDSFNAWQSGEYVRAGWHFYNGAGVDQWLALTDTGVKIWGSAANLRVEGVGNFWDVEIRSDRRVKSNIAKIDNALDKVSKLSGNVYDLELPNGDTKPSAGLIAQEVQEVLPEAVTTDNDKDALLRLNYNAVIALLVESVKELKAEIEELKSK
Physico‐chemical
properties
protein length:1550 AA
molecular weight: 164330,36780 Da
isoelectric point:6,43386
aromaticity:0,07484
hydropathy:-0,32613

Domains

Domains [InterPro]
DC_1942
ATT
4–928
DC_1942 DC_2180 DC_0246
IPR030392
CHP
1458–1550
IPR030392
IPR030392
CHP
1458–1513
IPR030392 Coil
XHB24370.1
1 1550
Architecture
ATT
STR
RBD
ATT 4-928 | STR 1026-1131 | RBD 1144-1550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB24370.1
1 1550
Domain Start End Length (AA) Confidence
N-terminal 1 758 758 0,1418
Central domain 759 957 200 0,3323
C-terminal 958 1550 592 0,6346
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-758
Central
759-957
C-terminal
958-1550

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn529046-KEN25_1
[NCBI] 		3142664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB24370.1 [NCBI]
Genbank nucleotide accession
PP723049.1 [NCBI]
CDS location
range 58795 -> 63447
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCGTTGAATACACATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGGGTTCCTTTCTTAGATACTGCAGGTAATCTTAATGTTGATGGAACTACTACGTTAAAAGACAACGTTACTATTTCTCCGAATAAAGCGATCAATTTTGAAGCTTCAGATTTAAGCGGAGCATTAGTACGTCATATCACCGGTAAGTGTGCTAATAATGATGGCTGGTACATTGGAGCTGGTGGTGCATCTGACCAGGGATTTCTTGAAATCGGTACGTATGATAACGGAAATGAACCTATCTATTTTGTTCAAAGAACCGGTGGAACGACTCAAGCTGAAGTTCGTCGTTTAGCATTATTAGATGGGTTTGGCGATACCTCTATACCTGGGGACCTTCGTTTAACTGGTAAAACAGTAAAAATTTCAAACGGCAGCACTCTTACTTTGGAAATGGGTGTAGGTTCTAATGACGCATACATTAAAAACCTGAGAGGAGCTGGTGTTCTTCAATTAACCAATGACAGTAATCTGACATTCAGAAATTCCCAGGTTTATTACGCTATGAATGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACAAATGTGGAAAACAATCGTCAGGCGTGGCAATATACTATTTCTGCTGCAACTGCTGGAACTCCACGTTGGGTTAAAGTAGCTACAATTAAACACCCAGGAGATGCGTCTTCACAGTTAGATTTAATGATTACAGGTGGCATTGATTCTGGACACGGAAGACATTATGTTGATTTTATCACGCTATCTGGTCGCAATTTAACATCCTGGAGCACCAACAGTTTAGATAACTGGGTTGAATGGCGCCGGGTTGGGTCTCCTTCTAAAACGAACGTTCCAGAGTATTACGTTGTTAAAAACGATTCTGCTACAGATTCAGAGGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATACGGCAATGCCCTTTATGTTACAGTGCTAAACACCGCTGGATATAATGGTCAAGATAGCGGTAAAGTAATTATCTATGAAACCGGACAAGATACTGGTGCTACTACACCATCTGGAAGCATTCTTGTTTCAATGAAGCAAATTTTTGACAGTCTCGCAAAACCAGATTTCGGTGATACTACAGGCACTCTTCCGGTTAACCGCGGTGGTACAGGTGCTACTAACGTAGGAGACGCTCGAAATAACCTGGGTCTTAGAACTGCGGCTGTTCGTGATGTCGGTGAATCTAGCGGAAATGTGATGGAAGTCGGCGCTTTTGGTGTTGGCGGCGGCGGAAAATCAATTGTTGATATTACATCCGATGTCGATTTAATGAATCGCCTTAAAGCTATTGGTGGTACAACATTTAGGGCTAACGTTAAGACAGTAAATGGGAAAGCTGAGTATACCGGGTCTCCTTATTATTCGCATGGAGCAGGATTCTTTTCTAGAACCGGCGATACAATGGCTGCCCTTAATATCGATTATTCATCCGGTAATGTCAGAGTATTTGCTATAAATGACCGCGGATTGGCAGATGGTAAAGTAAGCTATAACATGCTTTACGGAACGTCAAATAAACCTAATGCCGATGATAACGACTTCGTATCTAAATCCCGTGGCGGTACTTTTGGAGCTGATGTTACAGTCAGTGGTGATATTACTGCTAATACCGTCAGTGGTAGGGTGTTAAAACTGTCCGGTGGCGGTGCAGCGTATGTTCCACCTTCTCAAGGTGCATACATATCTTGGAACAAAGAAAACGGGTCAGGTCGTACTGATTTTATTAACCATCGTTCAAATACTTCAACTGTTCCTGGCGGATTTGATTTTTGGAACTATGAAGGTAATACTAGCAACATGCGTCATCTGGCGCAAATTAGAAACACTGGGGATTTAGTATTATTCCCTTCTGACATATCTAAAGCTGTGACATTCCAGACTGATGGAAACATTGTTGGTGGTACTTTATTCGGTGGAAACTTAAACAATTATTTAAGTAATTTAACCGGAACTGCTAATAGCAAAGTATCCAAATCGGGTGACACCATGACCGGTAGATTAAACGTCTACCAATCTGATACAAATGCTGGAGCCCAGGCTATATACATTAAAGGCGTTCAGCATACACCGGTAGTTCTTGAAAGAAATACCGATGCAAACTTATCAATAGCGTTCAGATTAACTGGTGTTAATCCAATTCTTCAACGTAAACTTGGTTTAGCTAAAGATGGAACTCTTCGTTGGGGAACCGGTGATAACCAGACGGATAATGCTTTAGTATTTGATCAAAACAGCATTGGAATGGTTAGAGTTAACATGACTGGAGGTTATCTTGGACAAGAAGTTGCTGAAGACATTGGCGGAAGAACGTTGTCTATTGATGATCTTTTCTTGAATTCATCCGACGTTGGTACTCGTAGGGTTTATTCATGCTTAGCTCAAGGTCCTGGAGCAAATATTACTGGAATGCCTCCTGCGTTAACTAATCTGCAAGGTGATTTCATTCTTATCGTTGAAAAGATGAGATCAGCAGCTGGTGTAGATTTCCGTAATAAACAAACATTTATATCTGGACGTAATAATAAAACCTACTTTAGATATGGTGCTGGAACAGGAACTACTTCCGCGCCGGCGGTCAATTGGACGCCGTGGGAAGAAGTAATAACTACATCAAACACTAACGGTATTTTACCAATTTCGTCTGGCGGTACTGGAGCTAATACTGCCGCCGATGCTCGTAACAATTTTAACTTAGGTTTAGGGCAAACTGCGACGTTTGGTGGATTAATTGTTAATGGTGTTGGAAATAATGATCCAGTAGTCACGTTTAAGAATGGTGCTGTAATTCGCGAGGCCCAAGGTGGTAGTATTGGCGCATTAATTATGTCAGCTTCTACTACAGCATCAGCAGCCGCGAAATATATTGCTTTTCGTCCTTACGGCGATACATCTAATTCTGAGATTAGAGTCAAAGCATATGGCAATAATGAGACGATGCTTGAATGGGCGCAAGGCCCTGCTGTTCGTTCAAACACTGCAGGTGCTTTTGTAATCTATGCAAAAGCAGGTCAAGCGATTCATTTAAGACCGAATGGCGATACTGCAAGCCAATCAACTGTTATTGACCAAACTGGTAAAATGACAGTCGGCGGTGAGTTCGAGGCCCAGAACTCGAAAATCACAGGCAACTTGAACGTTTCTGAAGATAACAGAATGATCGTTCTTGGCAAAAACTCTGATATTGGTTTAGTCAAGAAAAACGGTATGCCAGGAAAAATGGCTATCGGTAAATCTAACTCATTTACCGTTATGGTATCTGCAAATACCAACAACCAAATTAATCCTGCTGACACGTTTAGCGATATATTCAAAGTTGATGCTAGCGGAAACCAAACTGTTTACGGAAATGCCCAAATTAACAGGCAGCTTACAGTAACAAGTAATACTAACTTGAACTCAGACTTGATAGTTAAAGGCAATTCTCGCTTCAGCGGTGTGATTAATGCTGATGGAAACATCAACGTCGCTTCTGGTAAGTTTGTTATTGCAGGTCAAGCTCCTACTGATAACTCGCACCTAACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGTGATACTTATCTTCCGTTAGCGGGTGGTACTGTAACCGGTAACCTTGACGTAACTGGCACCAGATTAAAAACCTGGCAGTTAGAAGTTGATGGCAAAAGTACTCTAAGAGGCGGGTTAGATGTTAGTAGCAGTCTTAAAGTTTCTAGCGGAAACTTAGTCGCCGCTGACACAACCAATGCTGGTGGTCTTTTTGCTAAAAACGGTAATGTTTACTGTGATGCAGGTTCAGCTGGTACAAACTCTAACTACTGGTTCCGTGATTCTGCTGGAAATGTCAGAGGTGTTATTTGGTCAAATGGTCAAAACGGTGACATGATTATCCGTAACCAAAGTGGCCGAGAGCTTGTATTCAGAAATGATGGATATCTGCAATTAGCCCACTTAGCACCAGGAAACACAGATAATGCAAACACCGTAAATGGAATACGTTTACAGCGCGGTGATACGATTTTCGATAGCTTTAACGCATGGCAGTCGGGTGAATATGTTCGCGCTGGTTGGCATTTCTATAACGGCGCTGGAGTTGACCAGTGGTTAGCACTTACAGATACTGGGGTAAAAATCTGGGGTAGTGCTGCTAATCTACGCGTTGAAGGTGTTGGTAATTTCTGGGACGTTGAAATTCGTTCTGACCGTCGTGTGAAATCAAATATTGCTAAGATTGATAACGCCCTTGATAAAGTGTCGAAGCTATCTGGTAATGTTTATGATTTAGAGCTTCCAAATGGTGATACTAAACCATCGGCTGGCCTTATCGCACAAGAAGTGCAGGAAGTTCTTCCTGAAGCAGTTACAACTGATAACGATAAAGATGCATTACTTCGTTTAAACTACAATGCAGTAATTGCGTTATTAGTCGAATCTGTTAAAGAGCTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e938d0d7e583960d3bcef95cb375da486a610af6b7b44396f793e2f856695bb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. 2024-12-12 — GenBank