Protein

View in Explore
Genbank accession
QPZ53660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKIINAIQKINPNAEVSILGDDINTCEITWHNGTTPIPKADIEAQFSAIEFDMAMEDLRAKRNRLLAETDYYALSDQTLSDEMRTYRQDLRDITEGLTTVEEVNAVVFPTKPA
Physico‐chemical
properties
protein length:113 AA
molecular weight: 12776,24540 Da
isoelectric point:4,44330
aromaticity:0,06195
hydropathy:-0,38850

Domains

Domains [InterPro]
DC_0890
STR
1–108
DC_0890
G3DSA:6.10.140.1310
STR
23–91
G3DSA:6.10.140.1310
IPR031893
ENZ
56–113
IPR031893
QPZ53660.1
1 113
Architecture
STR
STR 1-113
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53660.1 [NCBI]
Genbank nucleotide accession
MW273925.1 [NCBI]
CDS location
range 11557 -> 11898
strand -
CDS
ATGAAAATTATAAATGCAATACAAAAAATAAATCCTAATGCTGAAGTAAGTATCTTAGGAGATGATATTAACACTTGTGAAATAACTTGGCACAATGGAACAACACCTATTCCTAAAGCTGACATAGAAGCACAATTTTCAGCAATAGAATTTGATATGGCTATGGAAGATTTAAGAGCCAAAAGAAATAGATTACTTGCAGAAACAGATTATTATGCTTTATCAGATCAAACTTTATCTGATGAAATGAGAACTTACAGACAAGATTTAAGAGATATAACTGAAGGTTTGACAACAGTTGAAGAAGTAAATGCTGTTGTGTTTCCAACTAAACCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81e79ed2911c58568b9f345267c78d93f40b9420f1d1c019e5500384965cc8dc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank