Protein

View in Explore
Genbank accession
YP_453579.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASNLVVTPHPLTLDGQTHIPAQLLPGQSLYSFLAANAPDTLDGGWAVTIGGRQVPVEMWTKTFPKDGHLIEVRSTVDNKQAFQLIALLVLTYFTFGIGAAGGFVAAGYGAVAATAVYVAGSVIINKVLGPKPPKTPAAEESGGVYSLNGATNASRPYQALGIPFGAIDIAPDLLSKPYSYFEGDDQYLALLLTPGINVARVDNVRNGDNPFSNYPGSQLFTSGMSGMPQQAIPLFTDVDSQAGGALQDEDKNPAVVVRTTPPDTVRIQIDIEYTLFGKGKKGNALYNEGTVTAEYRTAGTGSWLNLETRYVTNKDMRVHRMTLKKDVPPGQYDVRVTRSVMSLTGDNDVAQFNFTSLTSVQRDTAQYLGISRVGIIFKATGQLSGTPNEIKMQVTAKPVQTWTGTQWRIADTVDNGLSNPGAQMLAYIRGYYDEAGNLIGGMGLSDMFIDIPAFQAFILHCEANDYKYNYYLRDSRTHSEVLESLALVGFGQVTNATGKISVAWAGANQPVTAVVGMGTIRQGQFGVDYTLSNTADGVELSYFDADIGDTSVVRVASPGVTTALNPARIQAEGITTAKHAAEMARYHLGQSLYQAKDITFGADIEHITYRRLSVLSLSHDLTQWGYSGRLMAAANISGVVTLYLDTEVPPPSAGSAYVGVRIPGELSYRVMQVRPFSAPSKSIQLVGAWPIDAAFPGASSDNPAWDTTYCYDFKSSPGYTVRVVGITPDSDLKGAQVSVVPESAEFWNYVKTGTYIPAPNGSGLNTRPTVSGLKIVEAQVVQGNTVFTELSATWEVSGPYARADVLMAEGSGDSLLQTSSTTRSATWRIPGAGVYTITVRPFNPDGLAGYAQSIVFATKGADAPPVNPDIFDVQQVSGGLRRYVWGFGSDTIQSADYAGVEIRYTSGSVQSPVWETMLPVAGDDGSGFHTAPFESPTPVSGTYTFSLRAVNTSGRLSDQTLTIVRTLGKNLGELLDQINNDVSKAIVDAFQRDEAEARARVDAINAVITQVQDEATARATAVQQVTTALNQSIADQTAALLNEQLDRQAAIQTANQLRQSGDESLAYQISQISAGTGMQFDGIKTWYFDTTSEGWNGTAASGYLNPGDVYATSPTGLGVNGNSYRYVKMRIKRVGTPVWSGQLGWRSAGGTWSSLALPAPTFDANGVATVDANDIPWADTTVDQIRVKLSDTVTSSNYYLFDWVAIGRPTPGASVALVEDVRQANVTALAAEAQQRNTLAVQLRGNYTGNDLDGLTSGLVYQERTARVTETSAISTRVDGMQVSLDGKASASALQTLSTKVETIDDRVTSASESVFALEAQLDGHTAGETGWTAGDTSVHVGARTVYSVIAESDLALARRVDTVSSDLGQFKGSATQQLQTLSTAQDAQAQLYQQVSASLDTKASTSSVNLLTTRVTQAEGNITANSQNIAQAQAAIANKADASAVSALQTTVTTIDGRTTANANSITAVQAAVDGKAAASTVLELTATVNSQGSTITSINSQAFLALNANNYIGGFKIGNNGQVVDFTVLADNFRIVAPAGGARLEYSAGTLRVYDNNNVLRVELGKLS
Physico‐chemical
properties
protein length:1571 AA
molecular weight: 166828,02460 Da
isoelectric point:4,94018
aromaticity:0,08020
hydropathy:-0,12457

Domains

Domains [InterPro]
DC_0129
STR
1–1099
DC_0129 DC_0793
IPR055385
ATT
255–362
IPR055385 DC_1268
YP_453579.1
1 1571
Architecture
STR
ATT
STR
STR
STR 1-254 | ATT 255-362 | STR 363-1099 | STR 1147-1567 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage OP1
[NCBI] 		2994040 Uroviricota > Caudoviricetes > Xipdecavirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_453579.1 [NCBI]
Genbank nucleotide accession
NC_007709.1 [NCBI]
CDS location
range 14743 -> 19458
strand +
CDS
ATGGCATCAAACTTAGTAGTTACCCCGCATCCACTAACATTGGACGGGCAGACACACATCCCGGCACAGCTTTTGCCTGGACAATCGTTGTATAGCTTCTTGGCAGCAAATGCCCCCGACACTTTGGATGGTGGCTGGGCAGTGACAATTGGTGGTAGGCAGGTCCCTGTAGAGATGTGGACTAAGACATTCCCCAAGGATGGTCACCTAATCGAGGTTCGCAGCACCGTAGATAACAAGCAGGCATTTCAGTTGATTGCATTGCTTGTACTTACATATTTCACTTTTGGCATAGGCGCAGCAGGTGGCTTCGTTGCTGCCGGATATGGTGCTGTTGCAGCAACTGCTGTGTATGTTGCTGGATCTGTTATAATCAATAAGGTTCTGGGCCCTAAGCCACCTAAAACTCCGGCGGCGGAAGAGTCCGGAGGTGTTTATAGCCTTAATGGGGCAACAAATGCGAGCAGGCCCTACCAGGCACTTGGTATCCCTTTTGGAGCCATTGATATTGCGCCTGACTTGCTTTCGAAGCCGTACTCTTACTTTGAGGGCGATGATCAGTATCTGGCATTATTGCTCACTCCTGGAATTAATGTTGCAAGGGTTGACAATGTTCGAAATGGCGACAACCCATTTTCAAACTACCCAGGCTCTCAGTTGTTTACATCCGGAATGTCTGGAATGCCTCAGCAGGCAATCCCATTGTTCACAGATGTCGATAGTCAGGCGGGCGGTGCGCTCCAGGATGAAGACAAGAACCCGGCAGTTGTCGTGAGAACAACCCCGCCAGACACCGTCCGTATCCAGATTGACATTGAATACACATTGTTTGGTAAAGGAAAGAAAGGCAATGCACTTTACAATGAGGGCACAGTCACAGCAGAGTATCGTACAGCAGGTACTGGGTCATGGCTAAATCTGGAGACGAGGTATGTAACAAATAAAGACATGCGTGTGCATCGTATGACCTTGAAGAAAGATGTACCGCCGGGCCAGTACGATGTTAGGGTTACTCGCAGTGTTATGTCACTTACTGGCGACAATGATGTGGCTCAGTTTAACTTCACTAGCCTCACATCTGTGCAGAGGGATACTGCACAGTACCTTGGCATTTCGAGGGTAGGTATCATCTTTAAGGCTACCGGCCAGCTGTCTGGCACGCCAAATGAGATAAAGATGCAGGTAACTGCCAAGCCGGTACAGACCTGGACTGGTACTCAGTGGAGGATTGCAGATACTGTAGACAATGGACTGAGCAACCCAGGTGCACAGATGCTGGCTTACATCCGTGGTTACTATGATGAGGCTGGTAATCTAATTGGTGGTATGGGCCTGTCAGATATGTTCATCGACATACCTGCATTCCAGGCTTTCATCTTGCACTGTGAGGCAAATGACTATAAGTACAACTACTACCTGCGTGATAGCAGGACACATAGCGAGGTACTTGAGTCACTTGCCCTTGTTGGCTTCGGTCAGGTCACGAATGCTACTGGCAAAATATCTGTTGCATGGGCAGGTGCAAATCAGCCTGTTACTGCTGTTGTTGGCATGGGTACAATTCGCCAAGGTCAGTTTGGTGTTGATTACACATTGTCAAACACTGCGGACGGTGTCGAGCTCAGCTACTTTGATGCGGATATCGGAGACACATCCGTTGTACGTGTTGCATCACCGGGTGTAACTACTGCACTAAACCCAGCACGTATCCAGGCAGAGGGCATCACCACTGCAAAGCATGCGGCAGAAATGGCACGTTACCATCTCGGTCAGTCACTGTATCAGGCAAAGGACATAACGTTCGGCGCAGACATTGAGCATATCACCTACCGAAGGCTGTCGGTGTTGTCACTGTCCCACGACCTGACGCAATGGGGTTACAGTGGTCGTTTGATGGCGGCTGCCAATATAAGTGGAGTTGTTACGCTGTACCTTGACACGGAAGTTCCGCCCCCGTCAGCAGGCAGTGCCTATGTAGGTGTTCGGATACCGGGCGAACTTAGTTACCGTGTTATGCAGGTAAGGCCATTCTCGGCCCCATCTAAGTCAATCCAACTTGTTGGTGCTTGGCCTATTGATGCTGCATTCCCGGGGGCCTCAAGTGACAACCCTGCTTGGGATACCACATACTGCTACGACTTTAAGTCAAGCCCTGGCTACACTGTGCGTGTTGTTGGTATTACCCCAGATTCCGACCTTAAGGGTGCCCAGGTGTCTGTTGTGCCAGAATCTGCGGAATTTTGGAACTACGTAAAGACAGGCACATATATACCAGCACCTAATGGCTCGGGTCTTAATACTCGACCTACAGTAAGCGGCCTGAAGATTGTTGAGGCGCAGGTTGTACAGGGTAATACGGTATTTACTGAGCTGAGTGCGACGTGGGAAGTATCCGGGCCGTATGCAAGGGCGGATGTGCTGATGGCGGAAGGATCAGGAGACAGCTTGTTGCAAACTTCCTCGACGACTCGCTCAGCAACCTGGAGGATTCCGGGTGCCGGTGTCTACACAATCACTGTCAGGCCATTTAATCCAGATGGTCTAGCAGGGTATGCACAAAGCATTGTATTTGCCACTAAGGGTGCAGATGCCCCGCCAGTCAATCCAGACATATTTGATGTCCAGCAAGTGTCGGGCGGTCTGCGCAGGTATGTGTGGGGATTTGGGTCTGATACCATCCAAAGTGCTGATTATGCAGGTGTCGAGATCCGGTATACGTCAGGGTCTGTACAGTCTCCAGTATGGGAGACTATGCTGCCTGTGGCAGGGGATGATGGGAGTGGTTTCCATACTGCACCATTTGAGTCGCCCACACCTGTATCTGGTACCTACACATTCTCGCTTCGGGCAGTAAATACATCTGGCCGTTTATCGGATCAAACTCTGACCATTGTGAGGACACTTGGCAAAAACCTGGGTGAGTTGCTAGATCAGATCAACAATGATGTATCTAAGGCAATCGTTGATGCTTTCCAGAGAGACGAGGCGGAGGCTCGGGCACGTGTGGATGCCATCAATGCTGTTATCACACAGGTGCAGGATGAGGCTACAGCACGTGCTACAGCAGTGCAGCAGGTAACTACTGCTCTCAATCAATCGATTGCAGATCAGACAGCAGCACTGCTCAATGAGCAGCTTGACAGACAGGCAGCAATACAGACTGCAAATCAGTTGAGGCAATCTGGTGATGAGTCTTTGGCTTACCAGATCTCGCAGATAAGTGCTGGTACAGGCATGCAGTTTGATGGTATTAAAACTTGGTACTTCGACACGACTAGTGAAGGCTGGAATGGCACTGCTGCATCGGGGTACCTGAATCCTGGGGATGTCTACGCCACTTCGCCCACAGGCCTTGGTGTAAATGGTAATTCCTATAGGTATGTCAAGATGCGGATCAAGAGGGTGGGAACACCTGTTTGGTCTGGGCAGCTTGGTTGGCGGAGTGCAGGCGGGACATGGTCCTCACTCGCACTGCCAGCTCCAACCTTTGATGCAAATGGGGTGGCAACAGTAGATGCTAATGATATCCCGTGGGCTGATACAACAGTTGACCAGATTAGGGTCAAGTTGTCAGACACTGTTACCTCTAGCAACTACTACTTGTTTGACTGGGTAGCTATTGGTCGACCAACACCTGGTGCATCTGTGGCGTTGGTTGAGGACGTCCGTCAGGCTAATGTAACTGCCCTGGCAGCAGAGGCCCAGCAGCGCAACACTTTGGCTGTACAGCTGAGAGGCAACTACACTGGCAATGACCTTGATGGGTTGACTAGTGGCCTGGTCTACCAAGAGAGGACAGCCCGTGTTACAGAGACATCGGCAATTAGTACGCGTGTTGATGGTATGCAAGTATCTCTGGACGGCAAGGCATCTGCATCGGCCTTGCAGACACTGTCAACAAAGGTAGAGACAATTGATGACAGGGTTACAAGTGCATCCGAGTCTGTATTCGCCCTGGAGGCACAGCTGGATGGGCACACAGCCGGTGAAACAGGCTGGACAGCCGGCGATACCAGTGTGCATGTTGGTGCCAGGACTGTATACAGTGTGATTGCTGAGTCGGACCTTGCACTGGCACGGCGAGTTGATACAGTGTCTTCTGACCTTGGTCAGTTCAAGGGTTCTGCGACGCAGCAGCTCCAAACGCTGTCAACGGCCCAGGATGCACAGGCGCAGCTATACCAGCAGGTGTCTGCATCACTTGACACAAAGGCCAGCACATCCTCTGTTAATCTGCTTACAACCAGGGTGACACAGGCTGAGGGTAACATAACTGCCAACTCTCAGAATATTGCACAGGCACAGGCAGCCATTGCAAATAAGGCAGATGCAAGTGCAGTAAGTGCCCTGCAAACAACTGTCACCACAATTGACGGGAGGACTACGGCCAATGCTAACTCAATCACGGCGGTACAGGCTGCTGTGGACGGTAAAGCAGCTGCTAGCACGGTGCTAGAGTTGACAGCTACGGTTAACTCTCAGGGATCCACAATTACATCAATCAACTCTCAGGCATTCTTGGCCCTTAATGCTAACAACTATATCGGCGGGTTTAAAATTGGCAATAATGGGCAGGTTGTGGACTTCACAGTTCTGGCAGACAATTTTAGGATTGTTGCTCCTGCTGGCGGTGCAAGGTTGGAATACAGTGCAGGCACACTGCGGGTATATGACAACAACAATGTTCTTAGAGTTGAGCTAGGTAAACTGAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
bf4fe336bc24e78b8991f671d244f1e5939468516eb9db2272fe2dc218298efa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7589
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage OP1, lytic for Xanthomonas oryzae pv. oryzae, changes its host range by duplication and deletion of the small domain in the deduced tail fiber gene Inoue,Y., Matsuura,T., Ohara,T. and Azegami,K. 2006 — GenBank