Protein

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Genbank accession
QXV85444.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MATRLHGILMDGLNKPIINATVALIAKGNTITVLNGSEAIFRTDGSGAYNVTVQTGHYKVIIGPQGIEPYKAGEIVIYGDSPEGSLNGYLINWAPEELTPDVIKQVQQLVANSEEYALQAGRSAAAANADATDARNSKASAASSASEALTYKNDSKANADAAKQAQSSAAGSANTATQAVTTITNLKKDVEKLKSDTQTIKNSAVSETQAIKDTAVSETTALKDAAAASATKAANSATEAGKQAGNAGTSATNAKNHADRAKTEADRAEAAANDAPEIQPLPDVWIPFNDSLDMITGFSPSYKKIVIGDDEITMPGDKIVKFKRASKATYINKSGVLTEAAIDEPRFERDGLLIEGQRTNYMLNSESPDSWGKSANINVADVGTDSFGFTYGKFVCNDSLIGQSTTLNMASVSNAGAVDVSGDNKYVTTSLRFKTDVELQLRIRFEAFDGSTTSNLGYVIVNTQSLSVNMSGVAASRITARVNKDEATGWIFVEATIQAIEEMYITSAIQYVSKAGGVIESGDYIYLATPQVEDGLCASSFIISGKTAATRASDMVTVPIKNNLYNLPFTVLCEVHKNWYKTPNAAPRVFDTGGHQTGAAIILAFGSSADYDGFPYCDIGRSNRRINENASLEKMVMGMRVKSDQSTCAVSNGRISSETKTTWTYIQSSATIRIGGQTTTGQRHLFGHVRNFRVWHKALTDRELKESV
Physico‐chemical
properties
protein length:708 AA
molecular weight: 75510,38510 Da
isoelectric point:5,70137
aromaticity:0,06780
hydropathy:-0,28489

Domains

Domains [InterPro]
IPR013609
ATT
1–134
IPR013609 DC_0141
IPR008969
ATT
5–78
IPR008969 Coil Coil
DC_1669
ATT
9–225
DC_1669
QXV85444.1
1 708
Architecture
ATT
STR
ATT 1-225 | STR 226-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV85444.1
1 708
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,8462
Central domain 193 391 200 0,1701
C-terminal 392 708 316 0,7985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-192
Central
193-391
C-terminal
392-708

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VogelGryff
[NCBI] 		2851989 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV85444.1 [NCBI]
Genbank nucleotide accession
MZ501110.1 [NCBI]
CDS location
range 18917 -> 21043
strand +
CDS
ATGGCAACTCGTCTACATGGTATTCTGATGGATGGTTTAAATAAACCAATCATCAACGCTACAGTTGCTCTTATTGCTAAAGGGAACACAATTACCGTTCTTAATGGTAGTGAGGCTATATTTCGCACTGACGGATCCGGTGCGTATAATGTAACTGTCCAGACTGGTCATTATAAAGTAATCATCGGACCTCAAGGTATTGAGCCTTATAAAGCTGGGGAAATCGTCATTTATGGCGATAGTCCTGAAGGTTCGCTGAACGGATATTTAATTAACTGGGCACCGGAAGAATTAACTCCGGACGTTATTAAACAAGTCCAGCAACTTGTAGCTAACTCTGAGGAATACGCTCTGCAAGCTGGACGGTCTGCTGCTGCTGCAAACGCAGACGCTACAGACGCACGTAACAGCAAAGCGTCCGCTGCCTCTTCTGCAAGTGAAGCACTTACATATAAGAACGATTCTAAAGCTAACGCAGATGCAGCTAAACAAGCCCAGTCCAGTGCTGCGGGCTCTGCTAACACTGCAACCCAAGCTGTAACCACAATAACAAATCTCAAAAAGGATGTTGAAAAGTTAAAGTCGGATACACAGACTATTAAGAATAGTGCAGTAAGCGAGACGCAAGCAATTAAGGACACCGCTGTGTCCGAAACTACCGCGCTAAAAGACGCTGCTGCTGCTTCAGCTACGAAAGCAGCTAATAGCGCCACCGAAGCTGGAAAACAAGCAGGCAACGCAGGTACAAGCGCAACAAACGCTAAGAACCACGCAGACCGTGCAAAGACAGAAGCTGACCGTGCGGAAGCTGCTGCCAACGATGCACCAGAAATCCAGCCGCTGCCTGATGTGTGGATACCATTTAACGATTCGCTGGATATGATTACGGGCTTTTCGCCATCATATAAAAAAATTGTTATTGGTGACGATGAAATAACGATGCCTGGCGACAAGATTGTTAAGTTTAAACGTGCATCGAAAGCAACCTATATTAACAAATCTGGTGTGCTGACAGAGGCTGCCATTGACGAGCCACGATTTGAACGTGATGGTCTGCTTATTGAGGGGCAAAGAACAAACTACATGCTCAATTCGGAAAGTCCAGATTCTTGGGGTAAATCTGCAAATATAAATGTCGCTGATGTTGGAACGGATAGTTTTGGTTTTACTTATGGAAAGTTTGTTTGTAATGATTCATTAATTGGGCAAAGTACAACCCTTAATATGGCATCAGTTTCAAACGCTGGGGCTGTCGATGTATCTGGCGATAATAAGTATGTGACAACATCGTTGAGATTCAAAACGGATGTTGAGCTCCAGTTAAGGATTAGGTTTGAAGCATTCGATGGCAGCACTACATCTAATCTTGGATATGTTATTGTTAATACACAGTCTTTATCAGTTAACATGAGCGGTGTAGCTGCCAGCAGGATTACCGCACGAGTCAACAAAGATGAAGCTACTGGTTGGATTTTTGTAGAGGCAACGATTCAAGCAATTGAAGAAATGTACATAACCTCTGCAATACAATATGTATCAAAAGCTGGTGGTGTTATTGAATCTGGTGACTATATTTATCTGGCCACTCCTCAGGTTGAGGATGGTTTGTGTGCATCATCTTTTATTATATCAGGAAAGACGGCGGCGACGCGCGCAAGCGATATGGTTACAGTTCCGATTAAGAATAATCTTTATAATCTTCCTTTTACGGTTCTTTGTGAGGTACATAAGAATTGGTACAAAACACCGAACGCAGCACCGCGAGTTTTTGATACTGGAGGTCATCAAACTGGAGCAGCAATCATTCTTGCATTTGGTTCTTCAGCAGATTACGATGGGTTTCCATATTGCGATATTGGTAGGTCTAACAGACGGATAAACGAAAATGCATCACTTGAAAAAATGGTTATGGGGATGCGTGTAAAGTCTGATCAGTCTACATGCGCAGTAAGTAACGGGCGTATATCTAGTGAAACAAAGACAACTTGGACTTATATTCAAAGCTCTGCAACCATTCGTATTGGTGGTCAGACAACAACGGGGCAGCGTCATTTATTCGGGCATGTCAGAAATTTTCGAGTATGGCATAAAGCATTGACTGACCGTGAATTGAAGGAGTCTGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b6b84f55a7652fa9929c73a21fd7babb02fc93665fa2012da6a6fc4a07f3eff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7698
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank