Protein

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Genbank accession
XPK43657.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPRLIFKNNFEVALAQPTTTSGTTITIRSGSGFPTLGANERVVATIVDAATGLQFEIVTVTAVVGNVLTVQRAQEGTAARAWAAGDMLSIRTTAATLTGTVRNFGIVPSGMNLNALTGTWFGQYFQNSNGGASSALNYPAQQAGVLEVLQTGVISESCIQRYTTFDSNNTYQRRFTMETQSWSSWVMIYSESTVIPVANGGTGQTTIDGVKSAFGFGAVADQDIVPTSMGGTGSADNAQAWLNIRPQGSTPLAGDPVNDYDATTKRWVENLVNTGTVGPSMNGVMNYGVGDFHLRDSRAYIQPYEVVADGQLLNRADWPELWAYAQMLSPIADADWLADPAKRGKYSLGNGTTTFRVPDRNGVQTGSIQALFGRGDGGNSSSNGVVSESGAPNIIYSAPHTMVTLASAPSQVATNGAFQSITSGDSPAAAGSGSRFIQTNFDASRCSPVYGRSAAEIVPRNFVGVWVIRASGGFVAADTQWQVINADSVRPGSGVKASSGQIRAQYKIGTVVEADAGLRCDAYMDGFYYAILSVYNKTKGVTKDLAFDDSGTLSSDRYAARYGSLMSWNETGTRIGTYATVRQSIGQNYAFNSLFSGGQQVDTGYATTLHHGLIHNNNGSFAQGTWLVVGDDNAQYQTRMNIQPNSHDVFFSVSILGSDSFYTLQKNAISDENLKHDIKPGTVEKAWSNLSSLEYVTFIYNNDEKERIRRGIIAQQAEIIDPLYVKTIKFYPSEGVEVEQKQLDTTPMLLDTMHVVQELMKKVESLEAEIAALKAAK
Physico‐chemical
properties
protein length:777 AA
molecular weight: 83464,97910 Da
isoelectric point:5,31833
aromaticity:0,09266
hydropathy:-0,20721

Domains

Domains [InterPro]
DC_0085
STR
1–777
DC_0085
cd19958
STR
105–189
cd19958 SSF88874 IPR030392
IPR030392
CHP
670–722
IPR030392 Coil
XPK43657.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK43657.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,9329
Central domain 215 413 200 0,0442
C-terminal 414 777 363 0,8724
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-413
C-terminal
414-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VerenaGrendelmeier_Bas101
[NCBI] 		3398438 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43657.1 [NCBI]
Genbank nucleotide accession
PQ850631.1 [NCBI]
CDS location
range 64653 -> 66986
strand -
CDS
ATGCCAAGGCTAATATTCAAAAACAACTTTGAGGTCGCGCTCGCTCAGCCAACGACGACTTCAGGCACCACAATCACAATCCGCTCAGGGTCGGGCTTTCCGACCTTGGGCGCAAACGAGCGTGTAGTGGCGACAATCGTCGACGCTGCAACAGGCCTCCAGTTCGAAATCGTCACAGTAACAGCCGTTGTTGGAAACGTTCTAACCGTGCAGCGTGCGCAGGAAGGTACTGCAGCTCGTGCATGGGCGGCGGGCGATATGCTTTCCATTCGAACTACTGCCGCGACTTTGACGGGCACTGTCCGAAACTTTGGGATTGTTCCATCCGGCATGAATCTTAATGCGCTTACAGGGACTTGGTTTGGGCAGTACTTCCAAAATTCAAACGGTGGTGCATCTTCAGCTTTGAATTACCCTGCGCAGCAAGCAGGAGTATTAGAAGTATTGCAGACAGGCGTTATATCAGAAAGTTGCATTCAACGATATACGACATTCGATTCCAACAATACATATCAAAGAAGATTCACCATGGAAACTCAATCATGGTCTTCTTGGGTCATGATTTATTCCGAGTCAACCGTAATCCCAGTAGCTAACGGCGGCACAGGCCAGACAACTATTGATGGTGTGAAGTCGGCCTTTGGATTTGGCGCAGTCGCTGATCAAGACATCGTGCCAACTTCCATGGGCGGCACAGGCTCTGCAGATAATGCTCAGGCTTGGTTGAACATACGCCCTCAAGGATCAACGCCGCTCGCTGGCGACCCAGTTAACGACTATGATGCTACTACGAAGCGTTGGGTTGAGAACTTGGTGAACACAGGCACCGTTGGCCCAAGTATGAACGGCGTGATGAACTATGGCGTCGGCGACTTCCACTTACGCGACAGCCGCGCTTATATTCAACCTTATGAAGTCGTCGCTGACGGTCAACTACTCAATCGTGCTGATTGGCCTGAGCTTTGGGCGTATGCGCAAATGCTTTCACCTATTGCTGATGCAGATTGGTTAGCAGACCCAGCAAAACGCGGCAAATATTCTCTGGGCAACGGAACGACGACGTTTCGAGTGCCTGACAGGAACGGTGTTCAAACTGGTTCCATACAGGCCTTATTTGGCAGGGGTGACGGTGGGAATTCATCATCCAACGGGGTTGTGTCTGAATCAGGCGCTCCAAATATAATTTACTCAGCGCCGCACACAATGGTGACGCTGGCTTCTGCACCAAGCCAGGTGGCAACTAATGGTGCTTTTCAGTCAATAACTTCGGGTGACTCTCCTGCGGCAGCAGGCTCTGGGTCAAGATTCATACAAACAAACTTTGACGCTTCTCGCTGCAGTCCTGTTTATGGTCGTTCAGCAGCGGAAATTGTTCCGCGCAACTTCGTCGGAGTTTGGGTGATTCGTGCATCGGGTGGATTCGTTGCCGCGGATACGCAATGGCAGGTCATCAATGCTGACTCCGTTCGCCCAGGTTCTGGAGTCAAGGCATCATCTGGTCAGATAAGGGCTCAATACAAAATCGGAACCGTCGTTGAGGCTGATGCTGGGCTTCGGTGCGATGCATACATGGATGGCTTTTATTATGCAATTTTATCTGTATATAACAAAACAAAAGGAGTTACAAAAGACCTTGCGTTTGATGATTCAGGAACCCTGAGTAGCGACCGATACGCAGCAAGATACGGAAGTCTCATGTCTTGGAATGAGACTGGCACAAGAATCGGCACTTATGCAACGGTGAGACAGTCAATAGGTCAAAACTATGCATTCAACAGCCTTTTTAGCGGCGGTCAACAAGTAGATACAGGCTATGCGACCACTCTTCATCACGGTTTGATCCACAATAATAATGGAAGTTTTGCTCAGGGGACTTGGCTTGTCGTAGGTGACGATAACGCGCAATACCAAACAAGGATGAACATCCAGCCAAACTCTCATGATGTATTCTTCTCTGTGTCAATTCTTGGATCAGATAGTTTTTACACGCTTCAGAAGAATGCCATCTCTGATGAGAATTTGAAGCATGACATAAAACCAGGAACGGTTGAAAAAGCATGGAGCAACCTTTCATCGCTGGAGTATGTAACGTTCATATACAACAATGATGAAAAGGAAAGGATAAGAAGGGGTATTATCGCTCAACAGGCAGAGATTATTGATCCTTTGTATGTTAAGACGATTAAATTCTATCCGAGTGAAGGTGTCGAAGTTGAACAAAAACAACTTGATACGACACCTATGCTTTTGGATACGATGCACGTGGTACAGGAGTTGATGAAAAAGGTCGAGTCACTAGAGGCAGAGATAGCCGCGCTAAAAGCAGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4aa38eba408607ed8e6ac373eba7e2d1071b1b45154176805aba121c13a7d369
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7187
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank