Protein

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Genbank accession

XRM22895.1 [GenBank]

Protein name

head morphogenesis protein

RBP type

TSP

Evidence DepoScope

Probability 0,55

Protein sequence

MSLIENFISHQVWLQRNASHEVNEMLPFIQQMRDEVRRQVLLFGDDNRTRKNLEKLLRDLEDILDGITTDWQNKLTEDLQTLAAYEADWTTKTLTANVDAEFVTPAPDQVWSAVKWNPLALNDKPADLFGMMAGWGDTEVNRLVTGVKMGFVQGKTTRQIVKEVVGAGGLADISQRNAATVIRTALNHVSTQARETTYKKNSDIIARYEWVSTLDSRTSTICRSRDGQKYEIGKGPLPPAHPNCLLGDTVVSTCSRVSNVFKRSYKGVVVYITTKSGRTLSITPNHQVMTDRGWVAAGELNLGSKLVCGNSRAISLHHKEDNVVAQFADVFSAANVAVDSSAVSTGPTTTEDFHGDGTDGEVEIVFVDRLSWDKVKSSLGEQVIDEKLPVTSCVDDSFPGLGSTDKLGVVGLSPSDSFVRGGRERESLLGGGFSHPKIHSIASVANGDAHLLENPNDWAARNADNLSDFDWSKAVGVEFDDVINLVFGEADFCGHVYNLENEHNWYLANGIIAHNCRSTTAPVVSDEYDFLDAGAKRAARGAEGGTQVDASTTYYEFLKQQPAWFQDEALGPVRGKIFRNSGISPEEFRVISVDGFGRPLTLQQMAELDKRVAEYLKGL

Physico‐chemical properties

protein length:	619 AA
molecular weight:	68080,33560 Da
isoelectric point:	5,18249
aromaticity:	0,07916
hydropathy:	-0,33344

Domains

Domains [InterPro]

DC_1147
ATT
1–135

DC_1147 DC_0892 DC_0892

Coil
Unmapped
50–70

Coil IPR006528 IPR006141 IPR030934

IPR006528
RBD
152–244

IPR006528 IPR036844

G3DSA:2.170.16.10
RBD
220–382

G3DSA:2.170.16.10

PF14890
Unmapped
254–515

PF14890

cd00081
RBD
255–307

cd00081

cd00081
RBD
255–305

cd00081

IPR006141
STR
256–290

IPR006141

XRM22895.1

1 619

Architecture

ATT

RBD

STR

RBD

ATT 1-135 | RBD 136-243 | STR 244-516 | RBD 517-619

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1147	ATT	DC_1147	1	135	Novel HMM	DC_1147	N-terminal	Low	Positional only	9 proteins / 9 hits
Coil	Unmapped	-	50	70	Coils	Coil	-	-	-	-
DC_0892	RBD	DC_0892	135	265	Novel HMM	DC_0892	C-terminal	Low	Positional only	9 proteins / 9 hits
IPR006528	RBD	DC_0508	147	244	InterPro cluster	Phage head morphogenesis domain	Central	Medium	Text match	2 proteins / 2 hits
IPR006528	RBD	DC_0508	152	244	InterPro cluster	Phage head morphogenesis domain	Central	Medium	Text match	2 proteins / 2 hits
G3DSA:2.170.16.10	RBD	G3DSA:2.170.16.10	220	382	Merged direct domain	G3DSA:2.170.16.10	C-terminal	Low	Positional only	27 proteins / 27 hits
IPR006141	STR	DC_0095	244	290	InterPro cluster	Intein N-terminal splicing region	Central	Low	Positional only	15 proteins / 16 hits
IPR036844	STR	IPR036844	250	516	Merged direct domain	Hint domain superfamily	Central	Low	Positional only	8 proteins / 8 hits
PF14890	Unmapped	-	254	515	Pfam	Intein splicing domain	-	-	-	-
cd00081	RBD	DC_0422	255	307	InterPro cluster	cd00081	C-terminal	Low	Positional only	32 proteins / 32 hits
cd00081	RBD	DC_0422	255	305	InterPro cluster	cd00081	C-terminal	Low	Positional only	32 proteins / 32 hits
IPR006141	STR	DC_0095	256	290	InterPro cluster	Intein N-terminal splicing region	Central	Low	Positional only	15 proteins / 16 hits
DC_0892	RBD	DC_0892	402	619	Novel HMM	DC_0892	C-terminal	Low	Positional only	9 proteins / 9 hits
IPR030934	RBD	DC_0392	495	516	InterPro cluster	Intein C-terminal splicing region	C-terminal	Low	Positional only	10 proteins / 10 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XRM22895.1

1 619

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	253	253	0,9698
Central domain	254	506	254	0,7109
C-terminal	507	619	112	0,5370

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-253

Central
254-506

C-terminal
507-619

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage SaI_NFG_5577 [NCBI]	3378339	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella enterica subsp. enterica serovar Infantis [NCBI]	595	Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Genbank protein accession

XRM22895.1 [NCBI]

Genbank nucleotide accession

PQ488694 [NCBI]

CDS location

range 6456 -> 8315
strand -

CDS

ATGAGCCTTATAGAAAACTTCATCAGCCACCAGGTCTGGCTCCAGCGCAACGCCTCACATGAGGTGAACGAGATGCTGCCGTTTATCCAGCAGATGCGCGACGAGGTGCGCCGGCAGGTTCTCCTGTTCGGTGACGACAACCGCACGCGGAAGAACCTGGAAAAGCTACTGCGCGACCTGGAAGACATCCTGGACGGCATAACCACGGACTGGCAGAACAAGCTGACCGAAGACTTGCAGACGCTGGCGGCCTATGAGGCTGACTGGACGACGAAGACGCTTACAGCTAACGTCGATGCTGAGTTTGTCACACCGGCGCCTGACCAGGTATGGTCTGCGGTTAAGTGGAATCCACTGGCGCTTAATGATAAGCCCGCCGACCTGTTTGGTATGATGGCTGGGTGGGGAGACACGGAGGTTAACCGCCTCGTCACCGGTGTTAAGATGGGCTTCGTGCAGGGAAAAACAACACGCCAGATTGTGAAGGAGGTCGTCGGAGCTGGGGGCCTGGCCGACATTTCTCAGCGTAATGCGGCAACAGTTATTCGCACCGCACTGAACCACGTATCTACCCAGGCGCGCGAAACTACGTACAAGAAGAACAGCGATATCATTGCGCGCTACGAGTGGGTGTCTACGCTGGACAGCCGCACATCTACCATCTGCCGCTCGCGAGACGGTCAGAAATATGAAATTGGCAAGGGGCCGCTTCCGCCGGCCCACCCAAATTGTTTACTTGGCGACACTGTGGTATCTACCTGTAGCCGTGTCTCGAACGTTTTTAAAAGGTCTTACAAAGGCGTCGTGGTCTATATCACTACAAAGTCCGGTCGCACCCTGTCTATTACCCCAAATCACCAGGTAATGACCGACCGTGGTTGGGTGGCTGCGGGCGAACTCAACCTCGGCAGCAAGCTCGTCTGCGGTAATAGTCGGGCTATTTCTCTCCATCATAAGGAAGATAACGTCGTAGCCCAGTTCGCCGATGTGTTTAGTGCGGCTAATGTAGCGGTCGATTCGTCGGCGGTCAGTACAGGCCCAACCACCACCGAAGACTTCCACGGCGACGGAACCGACGGCGAAGTCGAGATTGTATTTGTCGACCGCCTTTCCTGGGATAAAGTCAAGTCCAGTTTGGGCGAGCAAGTCATTGACGAGAAACTCCCAGTGACTTCCTGCGTTGATGATTCCTTCCCGGGCTTGGGCTCTACGGATAAGCTCGGCGTGGTCGGCCTTTCTCCCTCGGACAGCTTCGTGCGCGGCGGCAGAGAGCGCGAGTCTCTCCTCGGGGGTGGATTTAGCCATCCGAAGATACATAGCATCGCTTCCGTTGCGAATGGCGACGCCCATCTCCTTGAGAACCCGAATGATTGGGCTGCACGAAACGCCGATAATCTTTCCGATTTCGACTGGTCCAAGGCCGTCGGCGTAGAGTTTGATGATGTTATTAATCTGGTCTTCGGTGAAGCGGATTTTTGCGGGCATGTTTATAACCTCGAAAATGAGCACAATTGGTATCTCGCAAATGGCATTATAGCACATAACTGTCGCTCAACAACGGCGCCGGTAGTCAGTGACGAATATGACTTCCTGGACGCTGGTGCTAAACGTGCCGCTCGCGGAGCAGAAGGCGGTACACAGGTAGACGCGAGCACCACGTATTATGAATTCCTGAAGCAACAACCGGCATGGTTCCAGGATGAGGCGTTAGGCCCGGTTCGTGGTAAAATATTCCGTAACTCCGGCATAAGCCCGGAAGAGTTCCGCGTAATTTCCGTTGACGGCTTTGGCCGCCCGCTTACACTACAACAGATGGCTGAACTCGATAAACGAGTAGCCGAATACCTGAAGGGGTTATGA

Genome Context

Tertiary structure

PDB ID

cf1f09aab8fea4b4c81c857e2b81a6df68fa1984065285eff5603a88d8684f5b

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6508

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence