Protein

View in Explore
Genbank accession
YP_009007890.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MADQGLLGQSKPAGTTNTVLYTAPVDQTASAVLTIANDGTGAAYDVGIKDFNQKLTLDASTYKLHEGDIITGYRFTVDTAIGSDAGFNPNSVITSVSGESKFTFESFYIPPTTTVYVKDVAIRPLTVESLSGAFSVGDTLTTGTSPNDTTTLVYAVSDNILHVGPSTINGSGAEFADGDSVTNGSATATISTGGVGTGEEEFVFSTTTSGGIYNLYLTDTLELFADRTYRFDISHTSMTGRDFSLSETINGEWGPDNTAGNSDDGTEYVTNKTTSGTAGDGGSAYIQFAFGNADNVPTPLYFYDGGTGTAANANYGGSDRSVTVSENFEYLSFFVFDIEGTWTNSTDTFTVDGTTYTLSAQTAGPYGMVRSFSGTTLTVIKGIGSADFAGTDTFRDVPASNDGTRALATVSSVDVASNALEVTNYLTKDKTNAANNVDRLTSLVIGPGQSLIVESATQNNIFSLVGFQDNSTVLTKRVFGN
Physico‐chemical
properties
protein length:481 AA
molecular weight: 50294,01230 Da
isoelectric point:4,11221
aromaticity:0,09979
hydropathy:-0,15364

Domains

Domains [InterPro]
DC_0373
STR
1–481
DC_0373
YP_009007890.1
1 481
Architecture
STR
STR 1-481
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-MbCM100
[NCBI] 		1340812 Uroviricota > Caudoviricetes > Pantevenvirales > Acionnavirus > Acionnavirus monteraybay
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009007890.1 [NCBI]
Genbank nucleotide accession
NC_023584 [NCBI]
CDS location
range 22655 -> 24100
strand +
CDS
ATGGCTGATCAAGGACTTCTAGGGCAATCTAAACCAGCAGGCACTACAAATACAGTATTATATACTGCTCCTGTGGATCAAACTGCTAGTGCAGTATTAACCATTGCAAATGATGGTACTGGTGCTGCATATGATGTTGGAATTAAAGATTTCAATCAAAAATTAACTCTTGATGCATCGACATATAAGTTGCATGAAGGAGATATAATTACTGGATATAGATTTACGGTTGATACTGCTATCGGTTCTGATGCTGGATTTAACCCAAATTCAGTAATCACAAGCGTTAGTGGTGAAAGTAAATTTACATTTGAATCTTTTTACATTCCACCAACGACTACAGTTTATGTGAAGGATGTTGCAATTCGTCCTTTAACGGTCGAATCTCTCTCAGGAGCATTTTCTGTTGGTGATACACTTACAACAGGAACTTCTCCTAACGACACCACTACTTTAGTCTATGCAGTTTCTGACAACATTCTTCATGTTGGACCTTCTACAATTAATGGAAGTGGTGCTGAATTTGCCGATGGCGATTCTGTAACCAATGGATCAGCAACTGCAACAATTTCAACAGGTGGTGTTGGTACTGGTGAGGAAGAATTTGTATTCTCAACTACAACTTCTGGTGGAATTTATAATTTGTATCTAACCGATACATTGGAATTATTTGCAGATAGAACTTATCGCTTTGATATCTCTCATACTAGTATGACTGGTAGAGACTTTAGTTTATCTGAGACAATTAATGGTGAGTGGGGACCAGATAATACTGCTGGTAACTCTGATGATGGTACTGAATATGTAACTAATAAAACTACTAGTGGCACTGCTGGTGATGGTGGTAGTGCATATATTCAATTTGCATTTGGTAATGCAGATAATGTTCCGACTCCATTGTATTTTTATGATGGTGGCACAGGAACTGCTGCCAATGCAAACTATGGTGGTAGTGATCGTTCGGTAACGGTTTCGGAAAATTTCGAATATCTATCGTTCTTTGTCTTTGACATTGAAGGTACTTGGACAAATTCAACCGACACATTTACTGTTGATGGAACAACCTACACCCTATCTGCTCAAACAGCAGGTCCATACGGGATGGTTCGTTCTTTCAGTGGCACTACACTGACTGTTATTAAGGGTATTGGATCTGCTGATTTTGCAGGTACTGATACTTTCCGAGATGTTCCAGCATCTAATGATGGAACTAGAGCACTTGCTACCGTTAGTAGTGTTGATGTAGCATCAAACGCACTTGAAGTTACGAATTATCTTACAAAAGATAAAACGAATGCTGCAAACAATGTTGATAGACTTACATCTCTTGTCATTGGACCTGGGCAAAGTCTAATTGTCGAAAGTGCAACCCAGAATAACATCTTTAGTCTTGTAGGTTTCCAAGATAACTCTACAGTTCTGACAAAAAGAGTGTTCGGCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
345f93a28fc56c681514eda8cb2dcf7a1b4d4e3dcae03aecff122b8da2f74cb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4383
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50