Protein

View in Explore
Genbank accession
ATW62768.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNFSPDSLELRGEIPKSLLSQEQTEKLLEVEFRVSAQLNWVAQLLGWSGENYWNDLADTIAEKRRLLGGSFGVYGLRVYPEVLELRNWNFSVLVEWDDRIKAGQTIRVGDIVTNISSLEEESGRMVLFLSDNKENFFEAASSNNQIFVETPEECPSPFFRPEVEDYADYYFHCEVDGTDLILCPGWTEDSEIRFLDPVFLFKNSRVSFDAPVFLTSREDLEPEILPSYDQDEDRWYLDIPTMLGRNQFLVAPNNGDAKVRCFCISWDDPSDWLSDKIKDNFKGVWAQKGGKLPLHFVFDSLGVHGFDLENSYILDPVEVSVGFNELLDYVYYKKAKIGEGNTPNQVWWDPNSGSFYVWNGRPDACSPWVEVDLPNPPEITSTPEYVFSSIEGFVTNREELPPGTQVELDFLEGVAPWDNDVIESDLDGEWEIIPNLGATDGYDSDESTVEEYESRIIGVGGALMGEGSVRIYKSADGSHWVPTVFYYETVGELNKDEKFLPFNVRVVVKNADSLGAEDCPIKVSNLGIEINKLIPVTLIKDFRNDEWKIIPNNNLKYVGDTRLFLSGNTPVDGEIVQTEDRLSIYYYNRWVDNGNGDWVLEGDWVDISTGESTEPPSDLVNYNSVVVYCNGNVLTSGETLSEEDYVFSYLINPETGNLEFSYQATTLYGRVGFPLVEISDSVSGAFRFAISDLIFGGAPYRVVPDLRNSQEPLRVWKEEELVACSDPELLAQGTFANPLVAGMNLGPATSGWNKYHIRLPVEYRREGKEWRRAQRTCDAFCFGSSDTTPESMTRGSQGELPEIYEDLILRSQDPSKYSYVYSEPYLFSGVEVSKGYYDEPWKNSALLPGSSKRIGNWAPSNLESYDPHHNRRVKEGGEWAGQYAKIFRCNNLTGFFGADQRNGAMEVLEPPVWDASIYKYPTYEFREDPSYSSDPNDYRVEYAMFIAGLSVAGDSTYSPLAEVIAKNPLDGEMFSFFYGEYQTGDPPSADPEFSSVALLLRMDGETGSTEFIDESTNELPVNVYGDSVISSARGLWGGTSGYFDGDGDHLQIPDGEWLDLSGGGTVELRFSAKDISGEPRVIIGNATVGSNFVWAIGVNAAGFTLWMDHTAEIVQVPCPVEEDTWYALALTYDPLNGVHVFFDGKKKTENNNYVLMRPNGELPPGFVGYNNPEELFSGYVEDVRVSKGEIRFTADYELENSPPPDFGG
Physico‐chemical
properties
protein length:1209 AA
molecular weight: 135858,82520 Da
isoelectric point:4,28858
aromaticity:0,12655
hydropathy:-0,39843

Domains

Domains [InterPro]
IPR013320
STR
994–1188
IPR013320
G3DSA:2.60.120.200
STR
999–1192
G3DSA:2.60.120.200
PF13385
LEC
1045–1188
PF13385
ATW62768.1
1 1209
Architecture
STR
STR 994-1192 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBWM1
[NCBI] 		2053653 Uroviricota > Caudoviricetes > Aokuangvirus >
Host Synechococcus sp. CBW1002
[NCBI] 		1353134 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATW62768.1 [NCBI]
Genbank nucleotide accession
MG450654.1 [NCBI]
CDS location
range 49415 -> 53044
strand +
CDS
ATGCCAAACTTCTCACCGGATTCCCTGGAACTGAGGGGAGAGATTCCGAAATCCCTCCTCTCACAGGAGCAAACCGAGAAATTACTAGAAGTAGAGTTTCGGGTTTCCGCCCAGCTGAATTGGGTGGCTCAACTCTTGGGCTGGAGTGGGGAGAATTACTGGAATGACCTCGCTGATACGATAGCCGAAAAGCGCCGCTTGCTTGGTGGCTCTTTTGGAGTATACGGGTTGCGAGTGTACCCTGAAGTCCTAGAGCTCAGGAATTGGAACTTCTCTGTCCTTGTGGAGTGGGATGACCGGATCAAAGCTGGGCAAACAATCCGTGTTGGGGACATTGTTACGAATATATCCTCTCTGGAGGAGGAAAGCGGGAGAATGGTCCTCTTCCTCTCCGACAACAAGGAGAATTTCTTCGAAGCAGCGTCGAGCAATAATCAGATTTTCGTAGAGACTCCAGAGGAATGCCCCAGCCCATTCTTCAGACCGGAGGTTGAGGATTACGCCGACTATTACTTCCACTGTGAGGTGGATGGGACGGATTTGATTCTTTGTCCTGGATGGACGGAGGACAGTGAGATCCGCTTCCTTGACCCAGTATTCCTGTTCAAGAATTCTAGAGTGTCATTCGACGCCCCAGTATTCCTAACGTCCAGGGAAGACCTAGAGCCAGAAATCCTGCCTTCTTATGACCAGGATGAAGATCGGTGGTATCTCGACATCCCTACTATGTTGGGAAGGAATCAATTCCTTGTCGCCCCTAACAACGGTGATGCGAAAGTCCGCTGTTTCTGCATCTCTTGGGATGACCCTTCTGACTGGCTATCAGACAAGATCAAGGACAACTTCAAAGGTGTTTGGGCTCAGAAAGGCGGAAAGCTCCCCCTGCATTTCGTGTTTGATTCCTTGGGGGTGCACGGATTCGACCTTGAGAACTCCTATATTCTGGACCCCGTTGAAGTCTCTGTCGGATTCAATGAGCTTCTGGACTATGTGTACTACAAGAAGGCGAAGATAGGGGAAGGAAATACCCCCAACCAAGTGTGGTGGGATCCGAACAGTGGGTCATTTTACGTCTGGAACGGTCGCCCCGATGCATGTTCTCCTTGGGTTGAGGTGGATTTGCCCAATCCTCCGGAGATCACAAGCACTCCGGAATATGTCTTTAGTTCTATCGAGGGGTTTGTGACGAACAGGGAGGAATTGCCTCCTGGTACCCAAGTAGAGTTGGATTTCCTAGAAGGTGTGGCTCCATGGGACAACGATGTAATTGAGTCTGATCTGGATGGGGAATGGGAGATCATCCCAAATCTCGGAGCGACGGATGGCTATGATTCTGATGAGTCCACTGTGGAGGAGTACGAGTCTAGGATCATTGGGGTAGGGGGAGCTCTGATGGGAGAGGGTTCAGTCCGGATCTACAAATCTGCGGATGGCTCCCACTGGGTTCCCACGGTATTCTACTATGAGACTGTGGGGGAATTGAACAAAGACGAGAAATTCCTGCCGTTCAATGTCCGGGTTGTGGTTAAGAATGCGGATTCACTTGGGGCTGAGGATTGCCCAATCAAGGTGTCTAATCTCGGGATCGAGATCAACAAGCTAATCCCTGTCACATTGATTAAGGATTTCAGGAACGACGAGTGGAAAATAATTCCGAACAACAACCTCAAGTATGTAGGGGACACTAGATTATTCCTGTCTGGCAACACTCCGGTCGATGGGGAGATCGTCCAAACCGAGGATCGTCTTTCCATCTACTACTACAACAGGTGGGTGGACAATGGGAACGGGGATTGGGTGCTGGAAGGAGATTGGGTGGATATCTCCACCGGAGAGAGTACAGAACCCCCGAGCGACTTGGTGAACTACAACTCTGTTGTCGTTTATTGCAATGGGAATGTTCTGACATCTGGGGAAACCCTAAGCGAGGAAGACTATGTATTTTCCTATCTGATCAATCCGGAGACCGGAAACCTGGAGTTCTCATATCAGGCGACTACACTGTACGGCAGAGTTGGTTTCCCTCTGGTGGAGATTTCAGATTCAGTCTCTGGGGCATTCCGATTCGCAATCTCCGACCTAATCTTCGGCGGAGCGCCTTATCGTGTTGTCCCAGACTTAAGAAATTCCCAGGAACCCCTCCGAGTGTGGAAAGAGGAGGAATTGGTCGCCTGCTCTGACCCAGAACTATTGGCGCAGGGAACATTTGCTAATCCTCTGGTTGCTGGAATGAACCTCGGCCCAGCAACTTCTGGGTGGAATAAGTACCACATCCGCCTCCCTGTGGAGTACAGAAGGGAGGGAAAAGAGTGGCGTCGAGCTCAGAGAACGTGTGATGCCTTCTGCTTCGGAAGTTCCGACACCACTCCGGAATCCATGACGAGAGGGTCCCAAGGAGAACTTCCGGAAATATACGAAGACTTGATCCTTCGATCACAAGATCCCTCTAAATACTCCTATGTGTACTCCGAGCCCTACCTATTCTCCGGAGTCGAGGTGAGTAAGGGGTACTATGATGAGCCATGGAAGAATTCCGCACTGTTGCCTGGGAGTTCAAAGCGGATCGGTAATTGGGCTCCAAGTAATCTGGAAAGTTATGACCCGCACCACAACCGGAGAGTTAAGGAAGGCGGGGAGTGGGCCGGACAGTATGCGAAGATCTTCAGATGCAACAATCTGACCGGGTTTTTTGGGGCTGATCAAAGGAATGGGGCGATGGAAGTTCTAGAGCCTCCTGTGTGGGATGCTAGCATTTACAAATACCCCACTTACGAGTTCCGAGAGGATCCGTCTTATTCCTCAGATCCTAACGACTACAGGGTAGAGTATGCGATGTTTATCGCAGGTCTCTCAGTCGCTGGAGATTCCACATATTCTCCGCTTGCAGAAGTTATCGCGAAGAATCCTCTGGATGGGGAGATGTTCTCGTTCTTCTACGGAGAGTATCAGACCGGGGATCCCCCATCTGCTGATCCGGAATTCTCCAGTGTCGCCCTACTCCTTAGGATGGATGGGGAAACTGGAAGCACTGAATTCATTGACGAGAGTACGAATGAACTTCCGGTTAATGTGTATGGGGATTCCGTTATATCCTCTGCGAGAGGGCTGTGGGGCGGAACTTCCGGCTACTTTGATGGGGACGGCGACCACCTTCAGATCCCAGATGGGGAGTGGCTGGATCTCAGCGGAGGGGGAACTGTGGAACTCAGGTTCAGTGCGAAGGATATTTCTGGAGAACCAAGGGTCATTATTGGGAATGCTACCGTTGGATCAAACTTTGTTTGGGCTATCGGCGTTAACGCAGCCGGGTTCACCCTCTGGATGGATCACACTGCGGAGATCGTCCAAGTTCCTTGCCCTGTGGAAGAAGATACCTGGTATGCGCTCGCTCTCACCTACGATCCTCTCAATGGCGTTCATGTGTTCTTCGACGGGAAGAAGAAGACAGAGAACAATAACTATGTCCTCATGCGTCCCAATGGGGAACTTCCACCTGGGTTTGTCGGGTACAATAATCCAGAAGAGCTGTTCAGCGGCTATGTGGAAGATGTCAGAGTTAGCAAGGGAGAGATCAGATTCACCGCCGACTACGAACTTGAGAACTCTCCGCCCCCTGACTTCGGGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c9db0730e6b4d38ce06a843f72fbc8cee0e869fcc16421292b7775db7937530
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel phage-host interactions and evolution as revealed by a cyanomyovirus isolated from an estuarine environment Xu,Y., Zhang,R., Wang,N., Cai,L., Tong,Y., Sun,Q., Chen,F. and Jiao,N. 2018 30051557 GenBank