Protein
View in Explore- Genbank accession
- UXR28865.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MAIQGKRFKPKSVVSFYTEEGKIMARSKPEKQGNEIDSDIVSVNTMNDLNADAGTFQLVLTRKRPWHKTVASNDLVMISMSRNGEDDTKSTVMVGLVDDVRKTTTVQGNSVQRTITIVGRNFAKALINFEVGAVQEVEVTAASMGWLQGRVTFAGENSANIVKGVMEELVFKYMEYKFNNGKTLKDMMVMDLKSREGERLMDEKSFINYQGSMNSFLKEICDEPFNQLFWEVYDGKNTLVERPTPFNKDDWNKLKVHKITDEDVETDDIGRSDLESYTLFAVGMQQYFSKNDVSKSTNVPPLWNEEYFKKYGLKRLQRFTGYALFGSSEDMGDVSPILEKYQEDLYNWNILNPNFYNGYIVVRGDHKYKIGERLSFDSKEDGTVFEFFIESVAQDFVNNSYWKTKLGVTRGLPEDGKSRFSAPWGEHKKYEGGALGTAAGGSLEGGGGTSTGGTGGGGGLLPPGMGGSAKGVQIVNTALSWKSKPNRYVFGGGRTTSDIARGVFDCSSWIRYVFEQCGINAGPLSGTTTDTLAKLGQPVPSVMNLQLGDLVMFNTYKHNGHVTIYIGNGKCIGTQTNQGVAEIDMQWWINKYGLGSMRRLI
- Physico‐chemical
properties -
protein length: 601 AA molecular weight: 66920,85040 Da isoelectric point: 6,39839 aromaticity: 0,10483 hydropathy: -0,44925
Domains
Domains [InterPro]
DC_0587
STR
1–440
STR
1–440
IPR000064
ENZ
468–600
ENZ
468–600
IPR038765
STR
468–590
STR
468–590
IPR051202
Unmapped
469–593
Unmapped
469–593
IPR000064
ENZ
487–584
ENZ
487–584
1
601
Architecture
STR 1-440 | RBD 444-467 | STR 468-600 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
601
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 406 | 406 | 0,5556 |
| Central domain | 407 | 590 | 185 | 0,3097 |
| C-terminal | 591 | 601 | 10 | 0,2710 |
Note: Constraints were applied during segmentation.
Fixed 27 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 27 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-406
1-406
Central
407-590
407-590
C-terminal
591-601
591-601
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage Nachito [NCBI] |
2982875 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UXR28865.1
[NCBI]
Genbank nucleotide accession
OP380492
[NCBI]
CDS location
range 69207 -> 71012
strand +
strand +
CDS
ATGGCTATTCAAGGCAAACGTTTTAAACCCAAGTCAGTTGTTTCCTTCTACACTGAAGAGGGGAAAATCATGGCACGTTCTAAGCCAGAGAAACAAGGGAATGAGATTGATTCAGACATCGTGAGCGTTAATACAATGAACGATTTGAACGCTGATGCTGGAACATTTCAGTTAGTATTGACAAGGAAGCGACCTTGGCATAAAACAGTCGCTTCCAATGACCTTGTTATGATTTCGATGAGTCGTAATGGGGAAGATGACACGAAATCTACAGTTATGGTTGGTTTAGTGGATGATGTACGAAAGACTACAACAGTACAAGGTAACTCAGTTCAACGAACTATCACCATTGTAGGACGTAACTTTGCGAAGGCTCTTATCAACTTTGAGGTTGGGGCAGTTCAAGAAGTAGAAGTCACTGCGGCAAGTATGGGTTGGTTGCAGGGACGTGTTACATTTGCGGGAGAAAATTCAGCGAATATTGTGAAAGGCGTTATGGAAGAACTTGTATTCAAATATATGGAGTATAAGTTCAACAACGGAAAAACCTTGAAAGATATGATGGTGATGGACTTGAAGAGTCGTGAAGGGGAGCGACTAATGGATGAGAAATCTTTCATCAATTATCAAGGTAGTATGAACTCATTCCTTAAGGAGATATGTGACGAACCATTCAACCAACTATTCTGGGAAGTCTACGATGGAAAGAATACATTGGTTGAACGTCCTACTCCATTTAATAAGGACGACTGGAACAAACTCAAAGTTCATAAAATAACTGATGAAGATGTTGAGACAGACGACATTGGAAGAAGTGACCTTGAATCTTACACATTGTTTGCTGTCGGTATGCAACAATACTTTAGTAAGAATGACGTGAGTAAGTCAACCAACGTCCCACCTTTATGGAATGAAGAATACTTCAAGAAATACGGATTAAAGCGGCTTCAAAGGTTTACAGGGTATGCTCTCTTTGGTTCTTCTGAAGATATGGGCGATGTAAGTCCAATCTTAGAAAAGTATCAAGAAGACCTATACAACTGGAACATACTGAATCCGAACTTCTACAACGGTTACATTGTTGTGAGAGGAGACCACAAATACAAAATTGGAGAGCGGCTATCATTCGATTCAAAAGAGGACGGAACTGTGTTTGAGTTCTTCATTGAATCGGTTGCTCAAGACTTTGTAAACAACTCTTACTGGAAGACAAAGCTTGGTGTTACAAGAGGACTTCCAGAAGATGGAAAGTCACGTTTCTCAGCTCCTTGGGGAGAACATAAGAAATATGAAGGCGGTGCTTTAGGTACAGCCGCTGGAGGAAGCTTAGAAGGTGGAGGTGGAACTAGCACTGGTGGAACTGGCGGGGGTGGTGGTTTATTACCTCCTGGAATGGGTGGAAGTGCTAAAGGTGTACAGATTGTAAATACAGCTCTAAGTTGGAAGAGCAAACCAAACAGATATGTGTTCGGTGGAGGAAGGACAACTTCAGATATTGCTAGAGGTGTCTTTGACTGTTCTTCTTGGATTAGATATGTGTTTGAACAATGCGGTATAAACGCTGGACCACTTTCTGGTACAACTACAGACACGTTAGCGAAACTGGGACAACCCGTACCATCTGTAATGAATTTACAACTAGGTGATTTAGTAATGTTTAACACATATAAGCATAACGGTCACGTAACGATTTATATTGGTAACGGTAAATGTATTGGAACACAAACCAATCAAGGGGTTGCGGAGATTGATATGCAGTGGTGGATTAACAAATATGGATTAGGAAGTATGCGCAGACTAATCTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
c09007c8d86fbee50f4bb8fe8827e6638e2c4b0ccffaac7242c7dc25153ceec1
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50