Protein

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Genbank accession
YP_010078563.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPQTADSTRMQTCLQPSDQTSLASVTREQVIALEREIQNLPQADCPVRHYFAPGMYAREMTIPAGVVLTGAVHRHEHLCTVSKGRIMVSTDEGMKELAAPCTFISKPGTKRVGYAIEETVWTTYHATAETDLDRIIEEISESTVSELLGGKDNIQLMNQRRAEELRAPAGPVDSEEDEK
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19830,15830 Da
isoelectric point:4,96582
aromaticity:0,03911
hydropathy:-0,45531

Domains

Domains [InterPro]
DC_0531
STR
14–158
DC_0531
IPR011051
Unmapped
43–121
IPR011051
YP_010078563.1
1 179
Architecture
STR
STR 14-158 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Firinga
[NCBI] 		2759725 Uroviricota > Caudoviricetes > Firingavirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010078563.1 [NCBI]
Genbank nucleotide accession
NC_054961.1 [NCBI]
CDS location
range 17177 -> 17716
strand +
CDS
ATGCCTCAAACAGCCGACTCGACGCGCATGCAAACCTGCCTCCAGCCCTCCGACCAGACATCTCTCGCGTCAGTTACGCGCGAGCAGGTCATCGCGCTAGAGCGCGAGATTCAGAATCTTCCGCAGGCTGACTGCCCTGTTCGTCATTACTTCGCGCCAGGCATGTATGCGCGCGAGATGACGATCCCCGCTGGCGTTGTGCTCACTGGCGCAGTGCACCGGCATGAACACCTCTGCACGGTCTCCAAGGGCCGCATCATGGTCTCGACTGACGAGGGCATGAAAGAGTTGGCTGCTCCCTGCACGTTCATATCGAAGCCCGGCACAAAGCGCGTCGGCTACGCGATCGAGGAAACGGTTTGGACGACCTATCACGCTACCGCGGAGACGGATCTCGATCGGATCATCGAGGAAATCTCGGAATCCACGGTCAGCGAACTGCTGGGCGGCAAGGACAACATCCAGTTGATGAACCAACGCCGTGCTGAAGAACTGCGCGCGCCAGCTGGCCCTGTCGATTCCGAGGAGGATGAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6023b9174ece1c1668818def55ef81ef2dd603aaef0f2c298cf0fc500f79474
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7282
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank